Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
ATP6AP1LQ52LC2 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
ATP6AP1LQ52LC2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
ATP6AP1LQ52LC2 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
ATP6AP1LQ52LC2 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
ATP6AP1LQ52LC2 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.45■■□□□ 1.51
ATP6AP1LQ52LC2 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
ATP6AP1LQ52LC2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.45■■□□□ 1.5
ATP6AP1LQ52LC2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.45■■□□□ 1.5
ATP6AP1LQ52LC2 SUZ12P1-203ENST00000578195 985 ntBASIC24.45■■□□□ 1.5
ATP6AP1LQ52LC2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
ATP6AP1LQ52LC2 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC24.44■■□□□ 1.5
ATP6AP1LQ52LC2 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC24.44■■□□□ 1.5
ATP6AP1LQ52LC2 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC24.44■■□□□ 1.5
ATP6AP1LQ52LC2 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
ATP6AP1LQ52LC2 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ATP6AP1LQ52LC2 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ATP6AP1LQ52LC2 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ATP6AP1LQ52LC2 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ATP6AP1LQ52LC2 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
ATP6AP1LQ52LC2 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ATP6AP1LQ52LC2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
ATP6AP1LQ52LC2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
ATP6AP1LQ52LC2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
ATP6AP1LQ52LC2 AC108673.1-201ENST00000510422 1159 ntBASIC24.42■■□□□ 1.5
ATP6AP1LQ52LC2 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC24.42■■□□□ 1.5
ATP6AP1LQ52LC2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
ATP6AP1LQ52LC2 AC135983.2-203ENST00000454486 1613 ntBASIC24.42■■□□□ 1.5
ATP6AP1LQ52LC2 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
ATP6AP1LQ52LC2 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
ATP6AP1LQ52LC2 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
ATP6AP1LQ52LC2 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
ATP6AP1LQ52LC2 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
ATP6AP1LQ52LC2 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.39■■□□□ 1.49
ATP6AP1LQ52LC2 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
ATP6AP1LQ52LC2 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.38■■□□□ 1.49
ATP6AP1LQ52LC2 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
ATP6AP1LQ52LC2 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
ATP6AP1LQ52LC2 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.38■■□□□ 1.49
ATP6AP1LQ52LC2 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
ATP6AP1LQ52LC2 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.38■■□□□ 1.49
ATP6AP1LQ52LC2 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ATP6AP1LQ52LC2 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
ATP6AP1LQ52LC2 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ATP6AP1LQ52LC2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.37■■□□□ 1.49
ATP6AP1LQ52LC2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
ATP6AP1LQ52LC2 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
ATP6AP1LQ52LC2 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
ATP6AP1LQ52LC2 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
ATP6AP1LQ52LC2 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.35■■□□□ 1.49
ATP6AP1LQ52LC2 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.35■■□□□ 1.49
ATP6AP1LQ52LC2 WHAMMP2-203ENST00000563942 1603 ntBASIC24.35■■□□□ 1.49
ATP6AP1LQ52LC2 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ATP6AP1LQ52LC2 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
ATP6AP1LQ52LC2 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
ATP6AP1LQ52LC2 MIR6090-201ENST00000622481 60 ntBASIC24.34■■□□□ 1.49
ATP6AP1LQ52LC2 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
ATP6AP1LQ52LC2 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.33■■□□□ 1.49
ATP6AP1LQ52LC2 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
ATP6AP1LQ52LC2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
ATP6AP1LQ52LC2 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC24.32■■□□□ 1.48
ATP6AP1LQ52LC2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
ATP6AP1LQ52LC2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.32■■□□□ 1.48
ATP6AP1LQ52LC2 AC018358.1-201ENST00000631079 1402 ntBASIC24.32■■□□□ 1.48
ATP6AP1LQ52LC2 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.32■■□□□ 1.48
ATP6AP1LQ52LC2 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.31■■□□□ 1.48
ATP6AP1LQ52LC2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.31■■□□□ 1.48
ATP6AP1LQ52LC2 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
ATP6AP1LQ52LC2 DUX4L28-201ENST00000623687 678 ntBASIC24.31■■□□□ 1.48
ATP6AP1LQ52LC2 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
ATP6AP1LQ52LC2 LINC00273-201ENST00000539813 1452 ntBASIC24.31■■□□□ 1.48
ATP6AP1LQ52LC2 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.31■■□□□ 1.48
ATP6AP1LQ52LC2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
ATP6AP1LQ52LC2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
ATP6AP1LQ52LC2 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
ATP6AP1LQ52LC2 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
ATP6AP1LQ52LC2 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
ATP6AP1LQ52LC2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
ATP6AP1LQ52LC2 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ATP6AP1LQ52LC2 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
ATP6AP1LQ52LC2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
ATP6AP1LQ52LC2 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
ATP6AP1LQ52LC2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
ATP6AP1LQ52LC2 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC24.28■■□□□ 1.48
ATP6AP1LQ52LC2 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC24.28■■□□□ 1.48
ATP6AP1LQ52LC2 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
ATP6AP1LQ52LC2 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ATP6AP1LQ52LC2 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
ATP6AP1LQ52LC2 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
ATP6AP1LQ52LC2 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
ATP6AP1LQ52LC2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
ATP6AP1LQ52LC2 MIR3665-201ENST00000578708 105 ntBASIC24.26■■□□□ 1.47
ATP6AP1LQ52LC2 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.26■■□□□ 1.47
ATP6AP1LQ52LC2 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
ATP6AP1LQ52LC2 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
ATP6AP1LQ52LC2 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
ATP6AP1LQ52LC2 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
ATP6AP1LQ52LC2 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
ATP6AP1LQ52LC2 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC24.24■■□□□ 1.47
ATP6AP1LQ52LC2 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 14.7 ms