Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 USB1-206ENST00000562534 562 ntTSL 414.52□□□□□ -0.091e-9■■■■■ 34.8
LSM11P83369 USB1-211ENST00000565662 719 ntTSL 414.45□□□□□ -0.11e-9■■■■■ 34.8
LSM11P83369 USB1-215ENST00000569252 573 ntTSL 414.27□□□□□ -0.131e-9■■■■■ 34.8
LSM11P83369 USB1-208ENST00000563207 464 ntTSL 513.77□□□□□ -0.211e-9■■■■■ 34.8
LSM11P83369 AIMP2-204ENST00000415999 777 ntTSL 313.76□□□□□ -0.211e-9■■■■■ 34.8
LSM11P83369 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.09□□□□□ -0.311e-9■■■■■ 34.8
LSM11P83369 USB1-214ENST00000568848 548 ntTSL 413.04□□□□□ -0.321e-9■■■■■ 34.8
LSM11P83369 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.04□□□□□ -0.321e-9■■■■■ 34.8
LSM11P83369 USB1-207ENST00000563149 1751 ntTSL 2 BASIC12.27□□□□□ -0.451e-9■■■■■ 34.8
LSM11P83369 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC12.16□□□□□ -0.461e-9■■■■■ 34.8
LSM11P83369 AIMP2-201ENST00000223029 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.521e-9■■■■■ 34.8
LSM11P83369 USB1-205ENST00000561743 1135 ntTSL 3 BASIC11.65□□□□□ -0.541e-9■■■■■ 34.8
LSM11P83369 AIMP2-203ENST00000400479 1107 ntTSL 5 BASIC10.25□□□□□ -0.771e-9■■■■■ 34.8
LSM11P83369 TAPT1-206ENST00000505317 1376 ntTSL 221.91■■□□□ 1.11e-6■■■■■ 34.7
LSM11P83369 TAPT1-207ENST00000505603 1634 ntTSL 220.45■□□□□ 0.861e-6■■■■■ 34.7
LSM11P83369 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.815e-8■■■■■ 34.7
LSM11P83369 TEAD1-204ENST00000527376 477 ntTSL 318.93■□□□□ 0.625e-8■■■■■ 34.7
LSM11P83369 ERLIN1-201ENST00000370408 962 ntTSL 518.86■□□□□ 0.615e-8■■■■■ 34.7
LSM11P83369 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.12■□□□□ 0.495e-15■■■■■ 34.7
LSM11P83369 ANKRD11-211ENST00000566973 442 ntTSL 217.93■□□□□ 0.461e-48■■■■■ 34.7
LSM11P83369 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.31e-6■■■■■ 34.7
LSM11P83369 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.275e-8■■■■■ 34.7
LSM11P83369 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.75■□□□□ 0.275e-15■■■■■ 34.7
LSM11P83369 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.185e-8■■■■■ 34.7
LSM11P83369 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC15.73■□□□□ 0.115e-15■■■■■ 34.7
LSM11P83369 TAPT1-213ENST00000511156 483 ntTSL 315.67■□□□□ 0.11e-6■■■■■ 34.7
LSM11P83369 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.38■□□□□ 0.055e-15■■■■■ 34.7
LSM11P83369 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.06■□□□□ 05e-8■■■■■ 34.7
LSM11P83369 TMEM131-209ENST00000489507 568 ntTSL 313.96□□□□□ -0.175e-8■■■■■ 34.7
LSM11P83369 TMEM131-203ENST00000418629 1105 ntTSL 213.45□□□□□ -0.265e-8■■■■■ 34.7
LSM11P83369 STK24-206ENST00000481288 656 ntTSL 313.27□□□□□ -0.295e-8■■■■■ 34.7
LSM11P83369 STK24-207ENST00000491878 547 ntTSL 413.15□□□□□ -0.35e-8■■■■■ 34.7
LSM11P83369 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.345e-8■■■■■ 34.7
LSM11P83369 MAP4K4-211ENST00000427603 526 ntTSL 412.65□□□□□ -0.385e-15■■■■■ 34.7
LSM11P83369 NEK1-205ENST00000510108 1304 ntTSL 511.38□□□□□ -0.595e-8■■■■■ 34.7
LSM11P83369 TAPT1-212ENST00000510868 709 ntTSL 510.8□□□□□ -0.681e-6■■■■■ 34.7
LSM11P83369 NEK1-201ENST00000439128 5653 ntTSL 1 (best) BASIC10.43□□□□□ -0.745e-8■■■■■ 34.7
LSM11P83369 STK24-208ENST00000539966 9361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.815e-8■■■■■ 34.7
LSM11P83369 ANLN-204ENST00000424865 596 ntTSL 39.64□□□□□ -0.875e-8■■■■■ 34.7
LSM11P83369 HIPK1-203ENST00000369553 2883 ntTSL 1 (best) BASIC9.62□□□□□ -0.875e-8■■■■■ 34.7
LSM11P83369 HIPK1-202ENST00000361587 5766 ntTSL 1 (best)9.42□□□□□ -0.95e-8■■■■■ 34.7
LSM11P83369 NEK1-206ENST00000510533 5377 ntTSL 1 (best) BASIC9.33□□□□□ -0.925e-8■■■■■ 34.7
LSM11P83369 TAPT1-215ENST00000513359 749 ntTSL 59.09□□□□□ -0.951e-6■■■■■ 34.7
LSM11P83369 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.965e-8■■■■■ 34.7
LSM11P83369 MAP4K4-220ENST00000627726 3135 ntTSL 5 BASIC8.85□□□□□ -0.995e-15■■■■■ 34.7
LSM11P83369 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC8.76□□□□□ -1.011e-48■■■■■ 34.7
LSM11P83369 AC104170.1-202ENST00000426017 362 ntTSL 3 BASIC8.26□□□□□ -1.095e-8■■■■■ 34.7
LSM11P83369 ANKRD11-215ENST00000568512 294 ntTSL 28.25□□□□□ -1.091e-48■■■■■ 34.7
LSM11P83369 NEK1-203ENST00000507142 5556 ntAPPRIS P4 TSL 1 (best) BASIC8.23□□□□□ -1.095e-8■■■■■ 34.7
LSM11P83369 NEK1-207ENST00000511633 5536 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.135e-8■■■■■ 34.7
LSM11P83369 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC7.9□□□□□ -1.155e-15■■■■■ 34.7
LSM11P83369 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.165e-15■■■■■ 34.7
LSM11P83369 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC7.68□□□□□ -1.185e-15■■■■■ 34.7
LSM11P83369 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.235e-8■■■■■ 34.7
LSM11P83369 NEK1-204ENST00000509912 2971 ntTSL 27.22□□□□□ -1.255e-8■■■■■ 34.7
LSM11P83369 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC7.22□□□□□ -1.255e-15■■■■■ 34.7
LSM11P83369 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.275e-8■■■■■ 34.7
LSM11P83369 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC7.11□□□□□ -1.275e-15■■■■■ 34.7
LSM11P83369 HIPK1-201ENST00000340480 6997 ntTSL 1 (best) BASIC6.79□□□□□ -1.325e-8■■■■■ 34.7
LSM11P83369 RNU6-6P-201ENST00000606623 107 ntBASIC6.46□□□□□ -1.385e-8■■■■■ 34.7
LSM11P83369 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.43□□□□□ -1.385e-15■■■■■ 34.7
LSM11P83369 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.3□□□□□ -1.45e-8■■■■■ 34.7
LSM11P83369 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.3□□□□□ -1.45e-8■■■■■ 34.7
LSM11P83369 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.05□□□□□ -1.445e-8■■■■■ 34.7
LSM11P83369 MAP4K4-207ENST00000417294 4251 ntTSL 55.97□□□□□ -1.455e-15■■■■■ 34.7
LSM11P83369 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC13.79□□□□□ -0.25e-7■■■■■ 34.6
LSM11P83369 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC12.5□□□□□ -0.415e-7■■■■■ 34.6
LSM11P83369 MIR4435-2HG-205ENST00000431385 843 ntTSL 3 BASIC10.71□□□□□ -0.695e-7■■■■■ 34.6
LSM11P83369 MIR4435-2HG-211ENST00000443467 826 ntTSL 3 BASIC10.45□□□□□ -0.745e-7■■■■■ 34.6
LSM11P83369 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC9.15□□□□□ -0.955e-7■■■■■ 34.6
LSM11P83369 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC8.34□□□□□ -1.075e-7■■■■■ 34.6
LSM11P83369 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC13.06□□□□□ -0.326e-11■■■■■ 34.6
LSM11P83369 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.426e-11■■■■■ 34.6
LSM11P83369 MYOM3-203ENST00000448831 418 ntTSL 39.29□□□□□ -0.926e-11■■■■■ 34.6
LSM11P83369 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC6.2□□□□□ -1.421e-6■■■■■ 34.5
LSM11P83369 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.59□□□□□ -0.072e-7■■■■■ 34.3
LSM11P83369 TBCD-201ENST00000355528 7168 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.732e-7■■■■■ 34.3
LSM11P83369 CDYL-207ENST00000472453 1764 ntTSL 1 (best)23.6■■□□□ 1.379e-10■■■■■ 34.2
LSM11P83369 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.049e-10■■■■■ 34.2
LSM11P83369 CDYL-208ENST00000483019 773 ntTSL 211.49□□□□□ -0.579e-10■■■■■ 34.2
LSM11P83369 CDYL-201ENST00000328908 3419 ntTSL 1 (best) BASIC9.31□□□□□ -0.929e-10■■■■■ 34.2
LSM11P83369 CDYL-204ENST00000440139 690 ntTSL 38.85□□□□□ -0.999e-10■■■■■ 34.2
LSM11P83369 CDYL-209ENST00000491864 614 ntTSL 57.55□□□□□ -1.29e-10■■■■■ 34.2
LSM11P83369 ICE2-214ENST00000561124 544 ntTSL 411.36□□□□□ -0.591e-6■■■■■ 34.1
LSM11P83369 ICE2-203ENST00000558181 7060 ntTSL 1 (best)6.42□□□□□ -1.381e-6■■■■■ 34.1
LSM11P83369 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.481e-6■■■■■ 34.1
LSM11P83369 ICE2-202ENST00000558121 3338 ntTSL 1 (best)5.81□□□□□ -1.481e-6■■■■■ 34.1
LSM11P83369 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC11.88□□□□□ -0.512e-7■■■■■ 34
LSM11P83369 AC005261.2-201ENST00000593427 4258 ntBASIC5.62□□□□□ -1.511e-7■■■■■ 33.9
LSM11P83369 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.83■□□□□ 0.453e-47■■■■■ 33.9
LSM11P83369 SORT1-203ENST00000471996 469 ntTSL 316.87■□□□□ 0.293e-47■■■■■ 33.9
LSM11P83369 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.043e-47■■■■■ 33.9
LSM11P83369 SORT1-207ENST00000493736 583 ntTSL 211.74□□□□□ -0.533e-47■■■■■ 33.9
LSM11P83369 SORT1-204ENST00000482236 615 ntTSL 39.7□□□□□ -0.863e-47■■■■■ 33.9
LSM11P83369 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.173e-47■■■■■ 33.9
LSM11P83369 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.14□□□□□ -1.433e-47■■■■■ 33.9
LSM11P83369 SORT1-210ENST00000633956 561 ntTSL 45.62□□□□□ -1.513e-47■■■■■ 33.9
LSM11P83369 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.371e-9■■■■■ 33.9
LSM11P83369 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.48□□□□□ -0.091e-9■■■■■ 33.9
LSM11P83369 NECAB3-212ENST00000485976 1016 ntTSL 519.51■□□□□ 0.712e-9■■■■■ 33.8
Retrieved 100 of 11,495 protein–RNA pairs in 253.5 ms