RNA–Protein interactions for RNA: ENST00000369553.5

HIPK1-203, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 2,883 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-203ENST00000369553 NISCHQ9Y2I1 1504 aa21.58■■□□□ 1.05
HIPK1-203ENST00000369553 CCDC180Q9P1Z9 1646 aa18.73■□□□□ 0.59
HIPK1-203ENST00000369553 PELP1Q8IZL8 1130 aaKnown RBP18.58■□□□□ 0.56
HIPK1-203ENST00000369553 MYT1Q01538 1121 aa18.17■□□□□ 0.5
HIPK1-203ENST00000369553 ZCCHC6Q5VYS8 1495 aaKnown RBP18.14■□□□□ 0.49
HIPK1-203ENST00000369553 DCAF8L2P0C7V8 631 aa17.84■□□□□ 0.45
HIPK1-203ENST00000369553 DCAF1Q9Y4B6 1507 aa17.79■□□□□ 0.44
HIPK1-203ENST00000369553 SHROOM4Q9ULL8 1493 aa17.76■□□□□ 0.43
HIPK1-203ENST00000369553 ABCC9O60706 1549 aa17.72■□□□□ 0.43
HIPK1-203ENST00000369553 MYO15BQ96JP2 1530 aa17.52■□□□□ 0.4
HIPK1-203ENST00000369553 HRCP23327 699 aa17.46■□□□□ 0.39
HIPK1-203ENST00000369553 PRKCSHP14314 528 aaPredicted RBP17.45■□□□□ 0.38
HIPK1-203ENST00000369553 NACADO15069 1562 aa17.42■□□□□ 0.38
HIPK1-203ENST00000369553 TTBK1Q5TCY1 1321 aaPredicted RBP17.41■□□□□ 0.38
HIPK1-203ENST00000369553 SCRIBQ14160 1630 aa17.32■□□□□ 0.36
HIPK1-203ENST00000369553 SCAF1Q9H7N4 1312 aaKnown RBP17.29■□□□□ 0.36
HIPK1-203ENST00000369553 RB1CC1Q8TDY2 1594 aa17.26■□□□□ 0.35
HIPK1-203ENST00000369553 PPARGC1BQ86YN6 1023 aaKnown RBP17.22■□□□□ 0.35
HIPK1-203ENST00000369553 SUPT5HO00267 1087 aaKnown RBP17.1■□□□□ 0.33
HIPK1-203ENST00000369553 BCL11AQ9H165 835 aa17.08■□□□□ 0.32
HIPK1-203ENST00000369553 UNC13AQ9UPW8 1703 aa17.02■□□□□ 0.31
HIPK1-203ENST00000369553 FAM9AQ8IZU1 332 aaPredicted RBP16.93■□□□□ 0.3
HIPK1-203ENST00000369553 CECR2Q9BXF3 1484 aa16.82■□□□□ 0.28
HIPK1-203ENST00000369553 BICRAQ9NZM4 1560 aa16.82■□□□□ 0.28
HIPK1-203ENST00000369553 APLP2Q06481 763 aa16.8■□□□□ 0.28
HIPK1-203ENST00000369553 RSF1Q96T23 1441 aaPredicted RBP16.8■□□□□ 0.28
HIPK1-203ENST00000369553 ERICH6Q7L0X2 663 aa16.79■□□□□ 0.28
HIPK1-203ENST00000369553 PABPN1Q86U42 306 aaKnown RBP eCLIP16.75■□□□□ 0.27
HIPK1-203ENST00000369553 MROH2BQ7Z745 1585 aa16.72■□□□□ 0.27
HIPK1-203ENST00000369553 BAZ1AQ9NRL2 1556 aaPredicted RBP16.62■□□□□ 0.25
HIPK1-203ENST00000369553 WIZO95785 1651 aa16.6■□□□□ 0.25
HIPK1-203ENST00000369553 PCGF6Q9BYE7 350 aa16.59■□□□□ 0.25
HIPK1-203ENST00000369553 SMARCA4P51532 1647 aa16.58■□□□□ 0.24
HIPK1-203ENST00000369553 SLC24A1O60721 1099 aa16.52■□□□□ 0.24
HIPK1-203ENST00000369553 CENPBP07199 599 aaPredicted RBP16.48■□□□□ 0.23
HIPK1-203ENST00000369553 CHIC1Q5VXU3 224 aa16.41■□□□□ 0.22
HIPK1-203ENST00000369553 ACIN1Q9UKV3 1341 aaKnown RBP16.41■□□□□ 0.22
HIPK1-203ENST00000369553 GTF3C3Q9Y5Q9 886 aa16.4■□□□□ 0.22
HIPK1-203ENST00000369553 TOP2AP11388 1531 aaKnown RBP16.37■□□□□ 0.21
HIPK1-203ENST00000369553 NEUROD1Q13562 356 aa16.37■□□□□ 0.21
HIPK1-203ENST00000369553 PEG3Q9GZU2 1588 aa16.33■□□□□ 0.21
HIPK1-203ENST00000369553 ATAD2BQ9ULI0 1458 aa16.28■□□□□ 0.2
HIPK1-203ENST00000369553 EIF4G1Q04637 1599 aaKnown RBP16.26■□□□□ 0.19
HIPK1-203ENST00000369553 SMARCA2P51531 1590 aa16.25■□□□□ 0.19
HIPK1-203ENST00000369553 CCDC88BA6NC98 1476 aa16.24■□□□□ 0.19
HIPK1-203ENST00000369553 BAZ1BQ9UIG0 1483 aaKnown RBP16.18■□□□□ 0.18
HIPK1-203ENST00000369553 ANP32EQ9BTT0 268 aa16.16■□□□□ 0.18
HIPK1-203ENST00000369553 CSRNP3Q8WYN3 585 aa16.12■□□□□ 0.17
HIPK1-203ENST00000369553 NCAPD3P42695 1498 aa16.09■□□□□ 0.17
HIPK1-203ENST00000369553 HMGXB3Q12766 1538 aa16.07■□□□□ 0.16
HIPK1-203ENST00000369553 CC2D2AQ9P2K1 1620 aa16.02■□□□□ 0.16
HIPK1-203ENST00000369553 TRIM41Q8WV44 630 aa16.02■□□□□ 0.15
HIPK1-203ENST00000369553 ABCC8Q09428 1581 aa15.96■□□□□ 0.15
HIPK1-203ENST00000369553 ANO8Q9HCE9 1232 aaPredicted RBP15.93■□□□□ 0.14
HIPK1-203ENST00000369553 ZEB1P37275 1124 aaPredicted RBP15.93■□□□□ 0.14
HIPK1-203ENST00000369553 EIF5BO60841 1220 aaKnown RBP15.92■□□□□ 0.14
HIPK1-203ENST00000369553 DAXXQ9UER7 740 aaPredicted RBP15.86■□□□□ 0.13
HIPK1-203ENST00000369553 LOC105371045A0A1W2PR82 267 aa15.83■□□□□ 0.13
HIPK1-203ENST00000369553 PLEKHG5O94827 1062 aa15.81■□□□□ 0.12
HIPK1-203ENST00000369553 WRNQ14191 1432 aaPredicted RBP eCLIP15.78■□□□□ 0.12
HIPK1-203ENST00000369553 CFTRP13569 1480 aa15.77■□□□□ 0.12
HIPK1-203ENST00000369553 SYNJ1O43426 1573 aa15.76■□□□□ 0.11
HIPK1-203ENST00000369553 PRDM2Q13029 1718 aa15.71■□□□□ 0.11
HIPK1-203ENST00000369553 CADPSQ9ULU8 1353 aa15.7■□□□□ 0.1
HIPK1-203ENST00000369553 DNAJC5BQ9UF47 199 aa15.69■□□□□ 0.1
HIPK1-203ENST00000369553 UBE2Q2Q8WVN8 375 aa15.69■□□□□ 0.1
HIPK1-203ENST00000369553 SOGA1O94964 1423 aa15.67■□□□□ 0.1
HIPK1-203ENST00000369553 TOP2BQ02880 1626 aa15.64■□□□□ 0.09
HIPK1-203ENST00000369553 RUSC2Q8N2Y8 1516 aa15.64■□□□□ 0.09
HIPK1-203ENST00000369553 BIVM-ERCC5R4GMW8 1640 aa15.63■□□□□ 0.09
HIPK1-203ENST00000369553 EHMT2Q96KQ7 1210 aa15.62■□□□□ 0.09
HIPK1-203ENST00000369553 CUX1P39880 1505 aa15.62■□□□□ 0.09
HIPK1-203ENST00000369553 NESP48681 1621 aa15.61■□□□□ 0.09
HIPK1-203ENST00000369553 CCDC136Q96JN2 1154 aa15.59■□□□□ 0.09
HIPK1-203ENST00000369553 TRIM26Q12899 539 aaPredicted RBP15.58■□□□□ 0.08
HIPK1-203ENST00000369553 SALL2Q9Y467 1007 aaPredicted RBP15.57■□□□□ 0.08
HIPK1-203ENST00000369553 TSHZ2Q9NRE2 1034 aa15.56■□□□□ 0.08
HIPK1-203ENST00000369553 FANCD2Q9BXW9 1451 aa15.54■□□□□ 0.08
HIPK1-203ENST00000369553 EEA1Q15075 1411 aa15.54■□□□□ 0.08
HIPK1-203ENST00000369553 LAMC3Q9Y6N6 1575 aa15.52■□□□□ 0.08
HIPK1-203ENST00000369553 YTHDC1Q96MU7 727 aaKnown RBP15.5■□□□□ 0.07
HIPK1-203ENST00000369553 DIEXFQ68CQ4 756 aaKnown RBP15.47■□□□□ 0.07
HIPK1-203ENST00000369553 PODXL2Q9NZ53 605 aa15.45■□□□□ 0.06
HIPK1-203ENST00000369553 PKNOX2Q96KN3 472 aa15.42■□□□□ 0.06
HIPK1-203ENST00000369553 FGD5Q6ZNL6 1462 aa15.42■□□□□ 0.06
HIPK1-203ENST00000369553 CEP164Q9UPV0 1460 aa15.41■□□□□ 0.06
HIPK1-203ENST00000369553 DNMBPQ6XZF7 1577 aa15.41■□□□□ 0.06
HIPK1-203ENST00000369553 KIF21AQ7Z4S6 1674 aa15.41■□□□□ 0.06
HIPK1-203ENST00000369553 TOPBP1Q92547 1522 aa15.39■□□□□ 0.05
HIPK1-203ENST00000369553 KIF21BO75037 1637 aa15.39■□□□□ 0.05
HIPK1-203ENST00000369553 PDS5BQ9NTI5 1447 aa15.39■□□□□ 0.05
HIPK1-203ENST00000369553 GOLGA3Q08378 1498 aa15.38■□□□□ 0.05
HIPK1-203ENST00000369553 URB2Q14146 1524 aaKnown RBP15.38■□□□□ 0.05
HIPK1-203ENST00000369553 TNIKQ9UKE5 1360 aa15.36■□□□□ 0.05
HIPK1-203ENST00000369553 KIF27Q86VH2 1401 aa15.35■□□□□ 0.05
HIPK1-203ENST00000369553 UBTFP17480 764 aaKnown RBP15.33■□□□□ 0.04
HIPK1-203ENST00000369553 CUX2O14529 1486 aa15.33■□□□□ 0.04
HIPK1-203ENST00000369553 RAPGEF2Q9Y4G8 1499 aa15.33■□□□□ 0.04
HIPK1-203ENST00000369553 POLA1P09884 1462 aaPredicted RBP15.33■□□□□ 0.04
HIPK1-203ENST00000369553 RAD54L2Q9Y4B4 1467 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms