Protein–RNA interactions for Protein: P53617

NRD1, Protein NRD1, yeastyeast

Known RBP RIP-Chip data

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NRD1P53617 HXT11YOL156W 1704 nt8.06□□□□□ -1.12
NRD1P53617 SHC1YER096W 1539 nt8.06□□□□□ -1.12
NRD1P53617 YDL157CYDL157C 357 nt8.05□□□□□ -1.12
NRD1P53617 ILV2YMR108W 2064 nt8.05□□□□□ -1.12
NRD1P53617 RFC1YOR217W 2586 nt8.04□□□□□ -1.12
NRD1P53617 CBS1YDL069C 690 nt8.04□□□□□ -1.12
NRD1P53617 GRH1YDR517W 1119 nt8.04□□□□□ -1.12 RIP-Chip
NRD1P53617 ERV29YGR284C 933 nt8.04□□□□□ -1.12
NRD1P53617 PRM4YPL156C 855 nt8.04□□□□□ -1.12 RIP-Chip
NRD1P53617 FRE6YLL051C 2139 nt8.03□□□□□ -1.12 RIP-Chip
NRD1P53617 YLR311CYLR311C 348 nt8.03□□□□□ -1.12
NRD1P53617 SUT2YPR009W 807 nt8.03□□□□□ -1.12 RIP-Chip
NRD1P53617 ADA2YDR448W 1305 nt8.03□□□□□ -1.12
NRD1P53617 ERG12YMR208W 1332 nt8.03□□□□□ -1.12 RIP-Chip
NRD1P53617 LRO1YNR008W 1986 nt8.02□□□□□ -1.12
NRD1P53617 EHT1YBR177C 1356 nt8.02□□□□□ -1.13
NRD1P53617 PUP3YER094C 618 nt8.02□□□□□ -1.13
NRD1P53617 MFT1YML062C 1179 nt8.02□□□□□ -1.13
NRD1P53617 CSI1YMR025W 888 nt8.02□□□□□ -1.13
NRD1P53617 THI73YLR004C 1572 nt8.01□□□□□ -1.13
NRD1P53617 HMRA1YCR097W 381 nt8.01□□□□□ -1.13 RIP-Chip
NRD1P53617 MPC1YGL080W 393 nt8.01□□□□□ -1.13
NRD1P53617 YHM2YMR241W 945 nt8.01□□□□□ -1.13
NRD1P53617 SRM1YGL097W 1449 nt8.01□□□□□ -1.13
NRD1P53617 ABP1YCR088W 1779 nt8□□□□□ -1.13
NRD1P53617 YDL158CYDL158C 309 nt8□□□□□ -1.13
NRD1P53617 YPT31YER031C 672 nt8□□□□□ -1.13
NRD1P53617 CCE1YKL011C 1062 nt8□□□□□ -1.13
NRD1P53617 DCI1YOR180C 816 nt8□□□□□ -1.13
NRD1P53617 ATP2YJR121W 1536 nt7.99□□□□□ -1.13
NRD1P53617 YHP1YDR451C 1062 nt7.99□□□□□ -1.13 RIP-Chip
NRD1P53617 YHR145CYHR145C 357 nt7.99□□□□□ -1.13
NRD1P53617 MSA2YKR077W 1092 nt7.99□□□□□ -1.13
NRD1P53617 BUD20YLR074C 501 nt7.99□□□□□ -1.13 RIP-Chip
NRD1P53617 MRPL36YBR122C 534 nt7.99□□□□□ -1.13
NRD1P53617 YPR084WYPR084W 1371 nt7.98□□□□□ -1.13
NRD1P53617 HXT8YJL214W 1710 nt7.98□□□□□ -1.13
NRD1P53617 RSM23YGL129C 1353 nt7.97□□□□□ -1.13
NRD1P53617 MRP1YDR347W 966 nt7.97□□□□□ -1.13
NRD1P53617 YOL107WYOL107W 1029 nt7.97□□□□□ -1.13 RIP-Chip
NRD1P53617 HIS3YOR202W 663 nt7.97□□□□□ -1.13 RIP-Chip
NRD1P53617 PEX34YCL056C 435 nt7.97□□□□□ -1.13
NRD1P53617 GDH1YOR375C 1365 nt7.97□□□□□ -1.13
NRD1P53617 ELP4YPL101W 1371 nt7.97□□□□□ -1.13
NRD1P53617 DIP5YPL265W 1827 nt7.96□□□□□ -1.13
NRD1P53617 CHA1YCL064C 1083 nt7.96□□□□□ -1.14
NRD1P53617 OSW1YOR255W 837 nt7.96□□□□□ -1.14
NRD1P53617 YOR343CYOR343C 327 nt7.96□□□□□ -1.14
NRD1P53617 LEA1YPL213W 717 nt7.96□□□□□ -1.14
NRD1P53617 TOK1YJL093C 2076 nt7.96□□□□□ -1.14
NRD1P53617 GAL2YLR081W 1725 nt7.95□□□□□ -1.14
NRD1P53617 MDL2YPL270W 2322 nt7.95□□□□□ -1.14
NRD1P53617 BUD31YCR063W 474 nt7.95□□□□□ -1.14
NRD1P53617 YGR168CYGR168C 1131 nt7.95□□□□□ -1.14
NRD1P53617 HRA1HRA1 564 nt7.95□□□□□ -1.14
NRD1P53617 YMR206WYMR206W 942 nt7.95□□□□□ -1.14
NRD1P53617 YIF1YNL263C 945 nt7.95□□□□□ -1.14
NRD1P53617 TAD2YJL035C 753 nt7.94□□□□□ -1.14
NRD1P53617 YNL303WYNL303W 348 nt7.94□□□□□ -1.14
NRD1P53617 YOR072WYOR072W 315 nt7.94□□□□□ -1.14
NRD1P53617 TIM50YPL063W 1431 nt7.94□□□□□ -1.14
NRD1P53617 JHD1YER051W 1479 nt7.94□□□□□ -1.14 RIP-Chip
NRD1P53617 INO1YJL153C 1602 nt7.93□□□□□ -1.14
NRD1P53617 tD(GUC)BtD(GUC)B 72 nt7.93□□□□□ -1.14
NRD1P53617 tD(GUC)DtD(GUC)D 72 nt7.93□□□□□ -1.14
NRD1P53617 tD(GUC)G1tD(GUC)G1 72 nt7.93□□□□□ -1.14
NRD1P53617 tD(GUC)G2tD(GUC)G2 72 nt7.93□□□□□ -1.14
NRD1P53617 tD(GUC)I1tD(GUC)I1 72 nt7.93□□□□□ -1.14
NRD1P53617 tD(GUC)I2tD(GUC)I2 72 nt7.93□□□□□ -1.14
NRD1P53617 tD(GUC)J1tD(GUC)J1 72 nt7.93□□□□□ -1.14
NRD1P53617 tD(GUC)J2tD(GUC)J2 72 nt7.93□□□□□ -1.14
NRD1P53617 tD(GUC)J3tD(GUC)J3 72 nt7.93□□□□□ -1.14
NRD1P53617 tD(GUC)J4tD(GUC)J4 72 nt7.93□□□□□ -1.14
NRD1P53617 tD(GUC)KtD(GUC)K 72 nt7.93□□□□□ -1.14
NRD1P53617 tD(GUC)L1tD(GUC)L1 72 nt7.93□□□□□ -1.14
NRD1P53617 tD(GUC)L2tD(GUC)L2 72 nt7.93□□□□□ -1.14
NRD1P53617 tD(GUC)MtD(GUC)M 72 nt7.93□□□□□ -1.14
NRD1P53617 tD(GUC)OtD(GUC)O 72 nt7.93□□□□□ -1.14
NRD1P53617 PCL6YER059W 1263 nt7.93□□□□□ -1.14 RIP-Chip
NRD1P53617 YHL030W-AYHL030W-A 462 nt7.93□□□□□ -1.14
NRD1P53617 tL(UAA)B1tL(UAA)B1 84 nt7.92□□□□□ -1.14
NRD1P53617 tL(UAA)B2tL(UAA)B2 84 nt7.92□□□□□ -1.14
NRD1P53617 tL(UAA)DtL(UAA)D 84 nt7.92□□□□□ -1.14
NRD1P53617 SUP51tL(UAA)J 84 nt7.92□□□□□ -1.14
NRD1P53617 tL(UAA)KtL(UAA)K 84 nt7.92□□□□□ -1.14
NRD1P53617 tL(UAA)LtL(UAA)L 84 nt7.92□□□□□ -1.14
NRD1P53617 tL(UAA)NtL(UAA)N 84 nt7.92□□□□□ -1.14
NRD1P53617 YIL168WYIL168W 384 nt7.92□□□□□ -1.14
NRD1P53617 RCF1YML030W 480 nt7.92□□□□□ -1.14
NRD1P53617 SED5YLR026C 1023 nt7.91□□□□□ -1.14
NRD1P53617 ERG29YMR134W 714 nt7.91□□□□□ -1.14 RIP-Chip
NRD1P53617 SLX1YBR228W 915 nt7.91□□□□□ -1.14
NRD1P53617 FTH1YBR207W 1398 nt7.9□□□□□ -1.14
NRD1P53617 VHS2YIL135C 1311 nt7.9□□□□□ -1.14
NRD1P53617 TDH1YJL052W 999 nt7.9□□□□□ -1.14
NRD1P53617 MEX67YPL169C 1800 nt7.89□□□□□ -1.15
NRD1P53617 YAL026C-AYAL026C-A 438 nt7.89□□□□□ -1.15
NRD1P53617 PRE10YOR362C 867 nt7.89□□□□□ -1.15
NRD1P53617 DTR1YBR180W 1719 nt7.89□□□□□ -1.15
NRD1P53617 NDE2YDL085W 1638 nt7.89□□□□□ -1.15
Retrieved 100 of 7,029 protein–RNA pairs in 47.7 ms