Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.12■■□□□ 1.45
PTPN6P29350 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PTPN6P29350 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
PTPN6P29350 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
PTPN6P29350 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PTPN6P29350 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
PTPN6P29350 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
PTPN6P29350 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.11■■□□□ 1.45
PTPN6P29350 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PTPN6P29350 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC24.1■■□□□ 1.45
PTPN6P29350 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PTPN6P29350 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.09■■□□□ 1.45
PTPN6P29350 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.09■■□□□ 1.45
PTPN6P29350 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.09■■□□□ 1.45
PTPN6P29350 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PTPN6P29350 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
PTPN6P29350 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PTPN6P29350 BOD1-206ENST00000480951 814 ntTSL 2 BASIC24.07■■□□□ 1.44
PTPN6P29350 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PTPN6P29350 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.07■■□□□ 1.44
PTPN6P29350 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
PTPN6P29350 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PTPN6P29350 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PTPN6P29350 AP002414.2-202ENST00000590929 1450 ntBASIC24.06■■□□□ 1.44
PTPN6P29350 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
PTPN6P29350 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
PTPN6P29350 AC108673.1-201ENST00000510422 1159 ntBASIC24.05■■□□□ 1.44
PTPN6P29350 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC24.05■■□□□ 1.44
PTPN6P29350 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PTPN6P29350 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PTPN6P29350 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
PTPN6P29350 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.04■■□□□ 1.44
PTPN6P29350 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
PTPN6P29350 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
PTPN6P29350 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
PTPN6P29350 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC24.04■■□□□ 1.44
PTPN6P29350 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
PTPN6P29350 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PTPN6P29350 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PTPN6P29350 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PTPN6P29350 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.02■■□□□ 1.44
PTPN6P29350 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.02■■□□□ 1.44
PTPN6P29350 MIR6090-201ENST00000622481 60 ntBASIC24.02■■□□□ 1.44
PTPN6P29350 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.02■■□□□ 1.44
PTPN6P29350 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.02■■□□□ 1.44
PTPN6P29350 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
PTPN6P29350 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.02■■□□□ 1.43
PTPN6P29350 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.01■■□□□ 1.43
PTPN6P29350 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24■■□□□ 1.43
PTPN6P29350 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
PTPN6P29350 AC135983.2-203ENST00000454486 1613 ntBASIC24■■□□□ 1.43
PTPN6P29350 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
PTPN6P29350 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
PTPN6P29350 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PTPN6P29350 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PTPN6P29350 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
PTPN6P29350 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
PTPN6P29350 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.98■■□□□ 1.43
PTPN6P29350 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC23.98■■□□□ 1.43
PTPN6P29350 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.98■■□□□ 1.43
PTPN6P29350 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
PTPN6P29350 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.98■■□□□ 1.43
PTPN6P29350 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PTPN6P29350 MLEC-202ENST00000412616 841 ntTSL 3 BASIC23.97■■□□□ 1.43
PTPN6P29350 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.97■■□□□ 1.43
PTPN6P29350 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.97■■□□□ 1.43
PTPN6P29350 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PTPN6P29350 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PTPN6P29350 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
PTPN6P29350 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PTPN6P29350 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.96■■□□□ 1.43
PTPN6P29350 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PTPN6P29350 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PTPN6P29350 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.95■■□□□ 1.42
PTPN6P29350 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
PTPN6P29350 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.94■■□□□ 1.42
PTPN6P29350 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PTPN6P29350 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC23.94■■□□□ 1.42
PTPN6P29350 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
PTPN6P29350 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PTPN6P29350 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PTPN6P29350 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.94■■□□□ 1.42
PTPN6P29350 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
PTPN6P29350 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PTPN6P29350 WHAMMP2-203ENST00000563942 1603 ntBASIC23.93■■□□□ 1.42
PTPN6P29350 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.93■■□□□ 1.42
PTPN6P29350 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC23.93■■□□□ 1.42
PTPN6P29350 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
PTPN6P29350 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.93■■□□□ 1.42
PTPN6P29350 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
PTPN6P29350 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.92■■□□□ 1.42
PTPN6P29350 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC23.92■■□□□ 1.42
PTPN6P29350 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC23.92■■□□□ 1.42
PTPN6P29350 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC23.92■■□□□ 1.42
PTPN6P29350 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.92■■□□□ 1.42
PTPN6P29350 ABHD17AP4-201ENST00000411545 909 ntBASIC23.91■■□□□ 1.42
PTPN6P29350 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PTPN6P29350 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
PTPN6P29350 AC018358.1-201ENST00000631079 1402 ntBASIC23.9■■□□□ 1.42
PTPN6P29350 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 747.1 ms