Protein–RNA interactions for Protein: P21359

NF1, Neurofibromin, humanhuman

Predictions only

Length 2,839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NF1P21359 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NF1P21359 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NF1P21359 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
NF1P21359 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.15■□□□□ 0.98
NF1P21359 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
NF1P21359 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.14■□□□□ 0.98
NF1P21359 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.14■□□□□ 0.97
NF1P21359 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NF1P21359 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.13■□□□□ 0.97
NF1P21359 SPCS2P3-201ENST00000500401 656 ntBASIC21.13■□□□□ 0.97
NF1P21359 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
NF1P21359 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
NF1P21359 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
NF1P21359 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
NF1P21359 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NF1P21359 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
NF1P21359 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NF1P21359 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NF1P21359 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.1■□□□□ 0.97
NF1P21359 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
NF1P21359 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
NF1P21359 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
NF1P21359 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.1■□□□□ 0.97
NF1P21359 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NF1P21359 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
NF1P21359 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
NF1P21359 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.09■□□□□ 0.97
NF1P21359 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
NF1P21359 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.07■□□□□ 0.96
NF1P21359 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.07■□□□□ 0.96
NF1P21359 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NF1P21359 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.06■□□□□ 0.96
NF1P21359 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NF1P21359 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NF1P21359 DUX4L9-201ENST00000449051 1259 ntBASIC21.05■□□□□ 0.96
NF1P21359 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC21.05■□□□□ 0.96
NF1P21359 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NF1P21359 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NF1P21359 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NF1P21359 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NF1P21359 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.03■□□□□ 0.96
NF1P21359 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NF1P21359 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.02■□□□□ 0.96
NF1P21359 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NF1P21359 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
NF1P21359 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
NF1P21359 LINC00273-201ENST00000539813 1452 ntBASIC21.01■□□□□ 0.95
NF1P21359 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC21.01■□□□□ 0.95
NF1P21359 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
NF1P21359 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
NF1P21359 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
NF1P21359 AC103834.1-201ENST00000520383 144 ntBASIC21■□□□□ 0.95
NF1P21359 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21■□□□□ 0.95
NF1P21359 AC010980.1-201ENST00000587192 1142 ntBASIC21■□□□□ 0.95
NF1P21359 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC21■□□□□ 0.95
NF1P21359 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21■□□□□ 0.95
NF1P21359 ECEL1P2-201ENST00000461596 1295 ntBASIC21■□□□□ 0.95
NF1P21359 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21■□□□□ 0.95
NF1P21359 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
NF1P21359 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.99■□□□□ 0.95
NF1P21359 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
NF1P21359 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
NF1P21359 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
NF1P21359 AC007029.1-201ENST00000604183 313 ntBASIC20.99■□□□□ 0.95
NF1P21359 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
NF1P21359 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
NF1P21359 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
NF1P21359 YBX1P4-201ENST00000392794 808 ntBASIC20.98■□□□□ 0.95
NF1P21359 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.98■□□□□ 0.95
NF1P21359 AC148477.6-201ENST00000623746 465 ntBASIC20.98■□□□□ 0.95
NF1P21359 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.98■□□□□ 0.95
NF1P21359 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
NF1P21359 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.97■□□□□ 0.95
NF1P21359 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.97■□□□□ 0.95
NF1P21359 AC009831.1-201ENST00000580420 1582 ntBASIC20.96■□□□□ 0.95
NF1P21359 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NF1P21359 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NF1P21359 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NF1P21359 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.95■□□□□ 0.94
NF1P21359 BHLHE23-202ENST00000612929 1109 ntBASIC20.95■□□□□ 0.94
NF1P21359 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.95■□□□□ 0.94
NF1P21359 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
NF1P21359 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.94■□□□□ 0.94
NF1P21359 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.94■□□□□ 0.94
NF1P21359 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.94■□□□□ 0.94
NF1P21359 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
NF1P21359 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.94■□□□□ 0.94
NF1P21359 AC133552.2-201ENST00000619106 1032 ntBASIC20.94■□□□□ 0.94
NF1P21359 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.93■□□□□ 0.94
NF1P21359 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NF1P21359 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
NF1P21359 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
NF1P21359 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
NF1P21359 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.92■□□□□ 0.94
NF1P21359 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.92■□□□□ 0.94
NF1P21359 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NF1P21359 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
NF1P21359 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.92■□□□□ 0.94
NF1P21359 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
NF1P21359 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms