Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.29■■□□□ 1.64
NDUFS3O75489 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
NDUFS3O75489 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
NDUFS3O75489 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
NDUFS3O75489 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.28■■□□□ 1.64
NDUFS3O75489 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
NDUFS3O75489 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
NDUFS3O75489 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC25.27■■□□□ 1.64
NDUFS3O75489 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
NDUFS3O75489 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
NDUFS3O75489 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
NDUFS3O75489 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
NDUFS3O75489 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
NDUFS3O75489 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
NDUFS3O75489 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
NDUFS3O75489 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC25.25■■□□□ 1.63
NDUFS3O75489 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
NDUFS3O75489 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
NDUFS3O75489 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
NDUFS3O75489 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
NDUFS3O75489 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
NDUFS3O75489 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC25.24■■□□□ 1.63
NDUFS3O75489 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC25.24■■□□□ 1.63
NDUFS3O75489 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
NDUFS3O75489 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
NDUFS3O75489 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
NDUFS3O75489 HGH1-207ENST00000628266 258 ntTSL 5 BASIC25.23■■□□□ 1.63
NDUFS3O75489 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
NDUFS3O75489 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
NDUFS3O75489 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
NDUFS3O75489 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.22■■□□□ 1.63
NDUFS3O75489 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
NDUFS3O75489 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
NDUFS3O75489 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
NDUFS3O75489 BX255925.1-201ENST00000566954 1854 ntBASIC25.21■■□□□ 1.63
NDUFS3O75489 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.21■■□□□ 1.63
NDUFS3O75489 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
NDUFS3O75489 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC25.21■■□□□ 1.63
NDUFS3O75489 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
NDUFS3O75489 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC25.19■■□□□ 1.62
NDUFS3O75489 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC25.19■■□□□ 1.62
NDUFS3O75489 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
NDUFS3O75489 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
NDUFS3O75489 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC25.19■■□□□ 1.62
NDUFS3O75489 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
NDUFS3O75489 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
NDUFS3O75489 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
NDUFS3O75489 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
NDUFS3O75489 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
NDUFS3O75489 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
NDUFS3O75489 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC25.17■■□□□ 1.62
NDUFS3O75489 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
NDUFS3O75489 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC25.17■■□□□ 1.62
NDUFS3O75489 LINC01003-201ENST00000564834 1764 ntBASIC25.17■■□□□ 1.62
NDUFS3O75489 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.15■■□□□ 1.62
NDUFS3O75489 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
NDUFS3O75489 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
NDUFS3O75489 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
NDUFS3O75489 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
NDUFS3O75489 MLEC-202ENST00000412616 841 ntTSL 3 BASIC25.14■■□□□ 1.62
NDUFS3O75489 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.14■■□□□ 1.61
NDUFS3O75489 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
NDUFS3O75489 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
NDUFS3O75489 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
NDUFS3O75489 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
NDUFS3O75489 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
NDUFS3O75489 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
NDUFS3O75489 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
NDUFS3O75489 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.13■■□□□ 1.61
NDUFS3O75489 AC110285.7-201ENST00000624417 1536 ntBASIC25.12■■□□□ 1.61
NDUFS3O75489 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
NDUFS3O75489 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
NDUFS3O75489 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC25.12■■□□□ 1.61
NDUFS3O75489 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
NDUFS3O75489 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
NDUFS3O75489 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
NDUFS3O75489 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
NDUFS3O75489 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
NDUFS3O75489 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
NDUFS3O75489 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
NDUFS3O75489 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
NDUFS3O75489 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NDUFS3O75489 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC25.09■■□□□ 1.61
NDUFS3O75489 LINC01971-201ENST00000617888 1048 ntBASIC25.09■■□□□ 1.61
NDUFS3O75489 AC018358.1-201ENST00000631079 1402 ntBASIC25.09■■□□□ 1.61
NDUFS3O75489 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
NDUFS3O75489 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
NDUFS3O75489 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC25.08■■□□□ 1.61
NDUFS3O75489 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.08■■□□□ 1.61
NDUFS3O75489 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
NDUFS3O75489 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.07■■□□□ 1.6
NDUFS3O75489 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
NDUFS3O75489 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
NDUFS3O75489 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
NDUFS3O75489 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.05■■□□□ 1.6
NDUFS3O75489 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.05■■□□□ 1.6
NDUFS3O75489 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
NDUFS3O75489 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.05■■□□□ 1.6
NDUFS3O75489 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
NDUFS3O75489 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms