Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.21■■□□□ 1.63
CCDC189A1A4V9 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC25.2■■□□□ 1.62
CCDC189A1A4V9 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC25.2■■□□□ 1.62
CCDC189A1A4V9 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CCDC189A1A4V9 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CCDC189A1A4V9 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC25.19■■□□□ 1.62
CCDC189A1A4V9 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CCDC189A1A4V9 AC108673.1-201ENST00000510422 1159 ntBASIC25.18■■□□□ 1.62
CCDC189A1A4V9 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
CCDC189A1A4V9 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.18■■□□□ 1.62
CCDC189A1A4V9 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.18■■□□□ 1.62
CCDC189A1A4V9 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CCDC189A1A4V9 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CCDC189A1A4V9 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CCDC189A1A4V9 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC25.17■■□□□ 1.62
CCDC189A1A4V9 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.17■■□□□ 1.62
CCDC189A1A4V9 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
CCDC189A1A4V9 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
CCDC189A1A4V9 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.16■■□□□ 1.62
CCDC189A1A4V9 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CCDC189A1A4V9 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
CCDC189A1A4V9 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
CCDC189A1A4V9 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
CCDC189A1A4V9 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
CCDC189A1A4V9 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CCDC189A1A4V9 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CCDC189A1A4V9 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC25.15■■□□□ 1.62
CCDC189A1A4V9 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
CCDC189A1A4V9 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CCDC189A1A4V9 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
CCDC189A1A4V9 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CCDC189A1A4V9 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CCDC189A1A4V9 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC25.14■■□□□ 1.61
CCDC189A1A4V9 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC189A1A4V9 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC189A1A4V9 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.13■■□□□ 1.61
CCDC189A1A4V9 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC189A1A4V9 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
CCDC189A1A4V9 BX255925.1-201ENST00000566954 1854 ntBASIC25.13■■□□□ 1.61
CCDC189A1A4V9 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC189A1A4V9 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC189A1A4V9 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CCDC189A1A4V9 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC189A1A4V9 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC189A1A4V9 MEST-211ENST00000437945 1455 ntTSL 5 BASIC25.11■■□□□ 1.61
CCDC189A1A4V9 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC189A1A4V9 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC25.11■■□□□ 1.61
CCDC189A1A4V9 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CCDC189A1A4V9 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC189A1A4V9 MIR3665-201ENST00000578708 105 ntBASIC25.1■■□□□ 1.61
CCDC189A1A4V9 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC189A1A4V9 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CCDC189A1A4V9 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.09■■□□□ 1.61
CCDC189A1A4V9 AP006261.1-201ENST00000584783 668 ntBASIC25.09■■□□□ 1.61
CCDC189A1A4V9 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.09■■□□□ 1.61
CCDC189A1A4V9 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.09■■□□□ 1.61
CCDC189A1A4V9 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
CCDC189A1A4V9 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC25.08■■□□□ 1.61
CCDC189A1A4V9 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.61
CCDC189A1A4V9 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
CCDC189A1A4V9 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
CCDC189A1A4V9 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
CCDC189A1A4V9 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.07■■□□□ 1.6
CCDC189A1A4V9 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CCDC189A1A4V9 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC25.07■■□□□ 1.6
CCDC189A1A4V9 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.07■■□□□ 1.6
CCDC189A1A4V9 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CCDC189A1A4V9 AP002414.2-202ENST00000590929 1450 ntBASIC25.07■■□□□ 1.6
CCDC189A1A4V9 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
CCDC189A1A4V9 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.06■■□□□ 1.6
CCDC189A1A4V9 AL121749.1-202ENST00000609313 2153 ntBASIC25.06■■□□□ 1.6
CCDC189A1A4V9 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC25.06■■□□□ 1.6
CCDC189A1A4V9 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CCDC189A1A4V9 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC25.06■■□□□ 1.6
CCDC189A1A4V9 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC25.05■■□□□ 1.6
CCDC189A1A4V9 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CCDC189A1A4V9 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CCDC189A1A4V9 AC135983.2-203ENST00000454486 1613 ntBASIC25.05■■□□□ 1.6
CCDC189A1A4V9 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CCDC189A1A4V9 DUX4L28-201ENST00000623687 678 ntBASIC25.05■■□□□ 1.6
CCDC189A1A4V9 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CCDC189A1A4V9 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC25.05■■□□□ 1.6
CCDC189A1A4V9 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CCDC189A1A4V9 AC100797.4-201ENST00000631653 1827 ntBASIC25.05■■□□□ 1.6
CCDC189A1A4V9 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCDC189A1A4V9 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCDC189A1A4V9 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCDC189A1A4V9 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCDC189A1A4V9 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
CCDC189A1A4V9 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC25.03■■□□□ 1.6
CCDC189A1A4V9 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCDC189A1A4V9 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
CCDC189A1A4V9 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
CCDC189A1A4V9 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCDC189A1A4V9 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
CCDC189A1A4V9 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCDC189A1A4V9 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCDC189A1A4V9 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.02■■□□□ 1.6
CCDC189A1A4V9 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
CCDC189A1A4V9 LINC01003-201ENST00000564834 1764 ntBASIC25.01■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms