Protein–RNA interactions for Protein: A0A1B0GTE1

LOC100289279, Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 492 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC100289279A0A1B0GTE1 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC22.28■■□□□ 1.16
LOC100289279A0A1B0GTE1 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
LOC100289279A0A1B0GTE1 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
LOC100289279A0A1B0GTE1 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
LOC100289279A0A1B0GTE1 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
LOC100289279A0A1B0GTE1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC22.28■■□□□ 1.16
LOC100289279A0A1B0GTE1 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LOC100289279A0A1B0GTE1 BX255925.1-201ENST00000566954 1854 ntBASIC22.27■■□□□ 1.16
LOC100289279A0A1B0GTE1 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC22.27■■□□□ 1.16
LOC100289279A0A1B0GTE1 AC021231.2-201ENST00000594613 730 ntBASIC22.27■■□□□ 1.16
LOC100289279A0A1B0GTE1 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
LOC100289279A0A1B0GTE1 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
LOC100289279A0A1B0GTE1 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
LOC100289279A0A1B0GTE1 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
LOC100289279A0A1B0GTE1 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LOC100289279A0A1B0GTE1 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC22.25■■□□□ 1.15
LOC100289279A0A1B0GTE1 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
LOC100289279A0A1B0GTE1 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
LOC100289279A0A1B0GTE1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC22.24■■□□□ 1.15
LOC100289279A0A1B0GTE1 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC22.24■■□□□ 1.15
LOC100289279A0A1B0GTE1 AC108673.1-201ENST00000510422 1159 ntBASIC22.23■■□□□ 1.15
LOC100289279A0A1B0GTE1 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
LOC100289279A0A1B0GTE1 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
LOC100289279A0A1B0GTE1 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
LOC100289279A0A1B0GTE1 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC22.22■■□□□ 1.15
LOC100289279A0A1B0GTE1 PROC-203ENST00000409048 1586 ntTSL 5 BASIC22.22■■□□□ 1.15
LOC100289279A0A1B0GTE1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC22.22■■□□□ 1.15
LOC100289279A0A1B0GTE1 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC22.22■■□□□ 1.15
LOC100289279A0A1B0GTE1 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC22.22■■□□□ 1.15
LOC100289279A0A1B0GTE1 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC22.21■■□□□ 1.15
LOC100289279A0A1B0GTE1 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
LOC100289279A0A1B0GTE1 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
LOC100289279A0A1B0GTE1 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
LOC100289279A0A1B0GTE1 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC22.21■■□□□ 1.15
LOC100289279A0A1B0GTE1 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.15
LOC100289279A0A1B0GTE1 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
LOC100289279A0A1B0GTE1 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.2■■□□□ 1.14
LOC100289279A0A1B0GTE1 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
LOC100289279A0A1B0GTE1 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC22.2■■□□□ 1.14
LOC100289279A0A1B0GTE1 AP004833.2-201ENST00000532228 1454 ntBASIC22.2■■□□□ 1.14
LOC100289279A0A1B0GTE1 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
LOC100289279A0A1B0GTE1 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.19■■□□□ 1.14
LOC100289279A0A1B0GTE1 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
LOC100289279A0A1B0GTE1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
LOC100289279A0A1B0GTE1 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
LOC100289279A0A1B0GTE1 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
LOC100289279A0A1B0GTE1 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
LOC100289279A0A1B0GTE1 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
LOC100289279A0A1B0GTE1 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
LOC100289279A0A1B0GTE1 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
LOC100289279A0A1B0GTE1 SHF-208ENST00000560734 1731 ntTSL 3 BASIC22.17■■□□□ 1.14
LOC100289279A0A1B0GTE1 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
LOC100289279A0A1B0GTE1 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
LOC100289279A0A1B0GTE1 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
LOC100289279A0A1B0GTE1 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
LOC100289279A0A1B0GTE1 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC22.16■■□□□ 1.14
LOC100289279A0A1B0GTE1 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
LOC100289279A0A1B0GTE1 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
LOC100289279A0A1B0GTE1 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
LOC100289279A0A1B0GTE1 MACF1-219ENST00000484793 834 ntTSL 2 BASIC22.16■■□□□ 1.14
LOC100289279A0A1B0GTE1 MIR6090-201ENST00000622481 60 ntBASIC22.16■■□□□ 1.14
LOC100289279A0A1B0GTE1 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC22.16■■□□□ 1.14
LOC100289279A0A1B0GTE1 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
LOC100289279A0A1B0GTE1 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
LOC100289279A0A1B0GTE1 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
LOC100289279A0A1B0GTE1 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
LOC100289279A0A1B0GTE1 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
LOC100289279A0A1B0GTE1 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
LOC100289279A0A1B0GTE1 MIR639-201ENST00000384974 98 ntBASIC22.15■■□□□ 1.14
LOC100289279A0A1B0GTE1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC22.15■■□□□ 1.14
LOC100289279A0A1B0GTE1 MIR4449-201ENST00000578365 66 ntBASIC22.15■■□□□ 1.14
LOC100289279A0A1B0GTE1 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
LOC100289279A0A1B0GTE1 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
LOC100289279A0A1B0GTE1 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC22.15■■□□□ 1.14
LOC100289279A0A1B0GTE1 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
LOC100289279A0A1B0GTE1 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
LOC100289279A0A1B0GTE1 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.14■■□□□ 1.13
LOC100289279A0A1B0GTE1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC22.13■■□□□ 1.13
LOC100289279A0A1B0GTE1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC22.12■■□□□ 1.13
LOC100289279A0A1B0GTE1 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
LOC100289279A0A1B0GTE1 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
LOC100289279A0A1B0GTE1 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC22.11■■□□□ 1.13
LOC100289279A0A1B0GTE1 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.11■■□□□ 1.13
LOC100289279A0A1B0GTE1 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
LOC100289279A0A1B0GTE1 AC127502.1-201ENST00000399971 1502 ntBASIC22.11■■□□□ 1.13
LOC100289279A0A1B0GTE1 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC22.1■■□□□ 1.13
LOC100289279A0A1B0GTE1 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC22.1■■□□□ 1.13
LOC100289279A0A1B0GTE1 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
LOC100289279A0A1B0GTE1 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
LOC100289279A0A1B0GTE1 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LOC100289279A0A1B0GTE1 AC016575.1-201ENST00000607026 382 ntBASIC22.09■■□□□ 1.13
LOC100289279A0A1B0GTE1 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
LOC100289279A0A1B0GTE1 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
LOC100289279A0A1B0GTE1 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
LOC100289279A0A1B0GTE1 LINC01003-201ENST00000564834 1764 ntBASIC22.08■■□□□ 1.13
LOC100289279A0A1B0GTE1 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
LOC100289279A0A1B0GTE1 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC22.08■■□□□ 1.13
LOC100289279A0A1B0GTE1 MIR3648-2-201ENST00000581792 180 ntBASIC22.08■■□□□ 1.13
LOC100289279A0A1B0GTE1 MIR3648-1-201ENST00000615959 180 ntBASIC22.08■■□□□ 1.13
LOC100289279A0A1B0GTE1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms