Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM56-RWDD3S4R434 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM56-RWDD3S4R434 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM56-RWDD3S4R434 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC15.66■□□□□ 0.1
TMEM56-RWDD3S4R434 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM56-RWDD3S4R434 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM56-RWDD3S4R434 HACD1-201ENST00000326961 773 ntTSL 2 BASIC15.66■□□□□ 0.1
TMEM56-RWDD3S4R434 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM56-RWDD3S4R434 APTR-203ENST00000430801 583 ntTSL 5 BASIC15.66■□□□□ 0.1
TMEM56-RWDD3S4R434 AC034268.1-201ENST00000441047 882 ntBASIC15.66■□□□□ 0.1
TMEM56-RWDD3S4R434 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM56-RWDD3S4R434 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC15.66■□□□□ 0.1
TMEM56-RWDD3S4R434 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC15.66■□□□□ 0.1
TMEM56-RWDD3S4R434 PARP1-210ENST00000629232 477 ntTSL 5 BASIC15.66■□□□□ 0.1
TMEM56-RWDD3S4R434 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM56-RWDD3S4R434 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM56-RWDD3S4R434 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
TMEM56-RWDD3S4R434 KRT8P8-201ENST00000434750 1448 ntBASIC15.66■□□□□ 0.1
TMEM56-RWDD3S4R434 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
TMEM56-RWDD3S4R434 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM56-RWDD3S4R434 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM56-RWDD3S4R434 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM56-RWDD3S4R434 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC15.66■□□□□ 0.1
TMEM56-RWDD3S4R434 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC15.66■□□□□ 0.1
TMEM56-RWDD3S4R434 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC15.66■□□□□ 0.1
TMEM56-RWDD3S4R434 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.66■□□□□ 0.1
TMEM56-RWDD3S4R434 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM56-RWDD3S4R434 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM56-RWDD3S4R434 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TMEM56-RWDD3S4R434 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM56-RWDD3S4R434 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM56-RWDD3S4R434 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM56-RWDD3S4R434 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TMEM56-RWDD3S4R434 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM56-RWDD3S4R434 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM56-RWDD3S4R434 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.65■□□□□ 0.1
TMEM56-RWDD3S4R434 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TMEM56-RWDD3S4R434 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM56-RWDD3S4R434 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
TMEM56-RWDD3S4R434 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM56-RWDD3S4R434 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM56-RWDD3S4R434 GOLGA6L3-201ENST00000507199 1679 ntBASIC15.65■□□□□ 0.1
TMEM56-RWDD3S4R434 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM56-RWDD3S4R434 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC15.65■□□□□ 0.1
TMEM56-RWDD3S4R434 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC15.65■□□□□ 0.1
TMEM56-RWDD3S4R434 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC15.65■□□□□ 0.1
TMEM56-RWDD3S4R434 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC15.65■□□□□ 0.1
TMEM56-RWDD3S4R434 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC15.65■□□□□ 0.1
TMEM56-RWDD3S4R434 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM56-RWDD3S4R434 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM56-RWDD3S4R434 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM56-RWDD3S4R434 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM56-RWDD3S4R434 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.65■□□□□ 0.1
TMEM56-RWDD3S4R434 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM56-RWDD3S4R434 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC15.65■□□□□ 0.1
TMEM56-RWDD3S4R434 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM56-RWDD3S4R434 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC15.65■□□□□ 0.1
TMEM56-RWDD3S4R434 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TMEM56-RWDD3S4R434 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM56-RWDD3S4R434 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM56-RWDD3S4R434 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM56-RWDD3S4R434 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM56-RWDD3S4R434 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM56-RWDD3S4R434 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC15.65■□□□□ 0.1
TMEM56-RWDD3S4R434 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM56-RWDD3S4R434 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM56-RWDD3S4R434 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC15.65■□□□□ 0.1
TMEM56-RWDD3S4R434 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TMEM56-RWDD3S4R434 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM56-RWDD3S4R434 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM56-RWDD3S4R434 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TMEM56-RWDD3S4R434 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM56-RWDD3S4R434 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM56-RWDD3S4R434 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC15.64■□□□□ 0.09
TMEM56-RWDD3S4R434 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM56-RWDD3S4R434 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM56-RWDD3S4R434 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
TMEM56-RWDD3S4R434 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.64■□□□□ 0.09
TMEM56-RWDD3S4R434 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM56-RWDD3S4R434 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TMEM56-RWDD3S4R434 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM56-RWDD3S4R434 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM56-RWDD3S4R434 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM56-RWDD3S4R434 AL390719.1-204ENST00000412397 1219 ntBASIC15.64■□□□□ 0.09
TMEM56-RWDD3S4R434 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC15.64■□□□□ 0.09
TMEM56-RWDD3S4R434 HES2-206ENST00000489730 730 ntTSL 2 BASIC15.64■□□□□ 0.09
TMEM56-RWDD3S4R434 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM56-RWDD3S4R434 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC15.64■□□□□ 0.09
TMEM56-RWDD3S4R434 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC15.64■□□□□ 0.09
TMEM56-RWDD3S4R434 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC15.64■□□□□ 0.09
TMEM56-RWDD3S4R434 AC231657.2-201ENST00000624556 255 ntBASIC15.64■□□□□ 0.09
TMEM56-RWDD3S4R434 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC15.64■□□□□ 0.09
TMEM56-RWDD3S4R434 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TMEM56-RWDD3S4R434 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM56-RWDD3S4R434 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC15.64■□□□□ 0.09
TMEM56-RWDD3S4R434 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TMEM56-RWDD3S4R434 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC15.64■□□□□ 0.09
TMEM56-RWDD3S4R434 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC15.64■□□□□ 0.09
TMEM56-RWDD3S4R434 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC15.64■□□□□ 0.09
TMEM56-RWDD3S4R434 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms