Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SNAP47Q5SQN1 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.61■□□□□ 0.57
SNAP47Q5SQN1 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SNAP47Q5SQN1 AL162377.1-201ENST00000618844 1793 ntBASIC18.6■□□□□ 0.57
SNAP47Q5SQN1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNAP47Q5SQN1 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNAP47Q5SQN1 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.6■□□□□ 0.57
SNAP47Q5SQN1 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNAP47Q5SQN1 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.6■□□□□ 0.57
SNAP47Q5SQN1 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNAP47Q5SQN1 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.6■□□□□ 0.57
SNAP47Q5SQN1 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SNAP47Q5SQN1 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SNAP47Q5SQN1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNAP47Q5SQN1 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
SNAP47Q5SQN1 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNAP47Q5SQN1 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNAP47Q5SQN1 TSPY14P-201ENST00000303979 915 ntBASIC18.6■□□□□ 0.57
SNAP47Q5SQN1 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.6■□□□□ 0.57
SNAP47Q5SQN1 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.6■□□□□ 0.57
SNAP47Q5SQN1 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.6■□□□□ 0.57
SNAP47Q5SQN1 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SNAP47Q5SQN1 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SNAP47Q5SQN1 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SNAP47Q5SQN1 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SNAP47Q5SQN1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SNAP47Q5SQN1 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.6■□□□□ 0.57
SNAP47Q5SQN1 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.6■□□□□ 0.57
SNAP47Q5SQN1 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNAP47Q5SQN1 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNAP47Q5SQN1 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SNAP47Q5SQN1 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SNAP47Q5SQN1 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SNAP47Q5SQN1 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.59■□□□□ 0.57
SNAP47Q5SQN1 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SNAP47Q5SQN1 AC099778.1-201ENST00000568593 1911 ntBASIC18.59■□□□□ 0.57
SNAP47Q5SQN1 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SNAP47Q5SQN1 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SNAP47Q5SQN1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNAP47Q5SQN1 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SNAP47Q5SQN1 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SNAP47Q5SQN1 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.59■□□□□ 0.57
SNAP47Q5SQN1 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.59■□□□□ 0.57
SNAP47Q5SQN1 AL590326.2-201ENST00000625139 305 ntBASIC18.59■□□□□ 0.57
SNAP47Q5SQN1 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.59■□□□□ 0.57
SNAP47Q5SQN1 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SNAP47Q5SQN1 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNAP47Q5SQN1 AC112907.3-201ENST00000577781 2400 ntBASIC18.59■□□□□ 0.57
SNAP47Q5SQN1 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNAP47Q5SQN1 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SNAP47Q5SQN1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.59■□□□□ 0.57
SNAP47Q5SQN1 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SNAP47Q5SQN1 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.59■□□□□ 0.57
SNAP47Q5SQN1 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
SNAP47Q5SQN1 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
SNAP47Q5SQN1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SNAP47Q5SQN1 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
SNAP47Q5SQN1 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SNAP47Q5SQN1 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
SNAP47Q5SQN1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SNAP47Q5SQN1 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
SNAP47Q5SQN1 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SNAP47Q5SQN1 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
SNAP47Q5SQN1 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SNAP47Q5SQN1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.58■□□□□ 0.57
SNAP47Q5SQN1 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.58■□□□□ 0.57
SNAP47Q5SQN1 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SNAP47Q5SQN1 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
SNAP47Q5SQN1 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.58■□□□□ 0.56
SNAP47Q5SQN1 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.58■□□□□ 0.56
SNAP47Q5SQN1 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.58■□□□□ 0.56
SNAP47Q5SQN1 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.58■□□□□ 0.56
SNAP47Q5SQN1 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.58■□□□□ 0.56
SNAP47Q5SQN1 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SNAP47Q5SQN1 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.58■□□□□ 0.56
SNAP47Q5SQN1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
SNAP47Q5SQN1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
SNAP47Q5SQN1 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.58■□□□□ 0.56
SNAP47Q5SQN1 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SNAP47Q5SQN1 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNAP47Q5SQN1 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNAP47Q5SQN1 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.57■□□□□ 0.56
SNAP47Q5SQN1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SNAP47Q5SQN1 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNAP47Q5SQN1 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNAP47Q5SQN1 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.57■□□□□ 0.56
SNAP47Q5SQN1 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SNAP47Q5SQN1 AC009237.14-201ENST00000609975 1594 ntBASIC18.57■□□□□ 0.56
SNAP47Q5SQN1 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNAP47Q5SQN1 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.57■□□□□ 0.56
SNAP47Q5SQN1 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.57■□□□□ 0.56
SNAP47Q5SQN1 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.57■□□□□ 0.56
SNAP47Q5SQN1 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.57■□□□□ 0.56
SNAP47Q5SQN1 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.57■□□□□ 0.56
SNAP47Q5SQN1 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SNAP47Q5SQN1 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.57■□□□□ 0.56
SNAP47Q5SQN1 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.57■□□□□ 0.56
SNAP47Q5SQN1 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.57■□□□□ 0.56
SNAP47Q5SQN1 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNAP47Q5SQN1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms