Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH20Q9HBT6 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH20Q9HBT6 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CDH20Q9HBT6 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH20Q9HBT6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH20Q9HBT6 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH20Q9HBT6 AL020996.1-203ENST00000536896 2307 ntBASIC16.78■□□□□ 0.28
CDH20Q9HBT6 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH20Q9HBT6 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH20Q9HBT6 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.78■□□□□ 0.28
CDH20Q9HBT6 RPS2P4-201ENST00000476944 856 ntBASIC16.78■□□□□ 0.28
CDH20Q9HBT6 AC233702.5-201ENST00000584107 538 ntBASIC16.78■□□□□ 0.28
CDH20Q9HBT6 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH20Q9HBT6 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
CDH20Q9HBT6 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.78■□□□□ 0.28
CDH20Q9HBT6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.78■□□□□ 0.28
CDH20Q9HBT6 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH20Q9HBT6 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.78■□□□□ 0.28
CDH20Q9HBT6 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CDH20Q9HBT6 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CDH20Q9HBT6 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH20Q9HBT6 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH20Q9HBT6 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDH20Q9HBT6 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
CDH20Q9HBT6 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH20Q9HBT6 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH20Q9HBT6 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDH20Q9HBT6 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
CDH20Q9HBT6 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH20Q9HBT6 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CDH20Q9HBT6 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CDH20Q9HBT6 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.77■□□□□ 0.28
CDH20Q9HBT6 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC16.77■□□□□ 0.28
CDH20Q9HBT6 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.77■□□□□ 0.28
CDH20Q9HBT6 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.77■□□□□ 0.28
CDH20Q9HBT6 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDH20Q9HBT6 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CDH20Q9HBT6 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CDH20Q9HBT6 AL160286.2-201ENST00000567150 934 ntBASIC16.77■□□□□ 0.28
CDH20Q9HBT6 Z99916.2-201ENST00000604037 246 ntBASIC16.77■□□□□ 0.28
CDH20Q9HBT6 AL445675.2-201ENST00000620291 557 ntBASIC16.77■□□□□ 0.28
CDH20Q9HBT6 AL049637.2-201ENST00000641778 930 ntBASIC16.77■□□□□ 0.28
CDH20Q9HBT6 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CDH20Q9HBT6 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDH20Q9HBT6 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDH20Q9HBT6 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CDH20Q9HBT6 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDH20Q9HBT6 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDH20Q9HBT6 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.77■□□□□ 0.27
CDH20Q9HBT6 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
CDH20Q9HBT6 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CDH20Q9HBT6 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CDH20Q9HBT6 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDH20Q9HBT6 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH20Q9HBT6 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH20Q9HBT6 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.76■□□□□ 0.27
CDH20Q9HBT6 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH20Q9HBT6 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDH20Q9HBT6 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDH20Q9HBT6 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDH20Q9HBT6 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH20Q9HBT6 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.76■□□□□ 0.27
CDH20Q9HBT6 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CDH20Q9HBT6 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.76■□□□□ 0.27
CDH20Q9HBT6 FAM197Y1-201ENST00000421178 764 ntBASIC16.76■□□□□ 0.27
CDH20Q9HBT6 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.76■□□□□ 0.27
CDH20Q9HBT6 AC093827.2-201ENST00000512654 315 ntBASIC16.76■□□□□ 0.27
CDH20Q9HBT6 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.76■□□□□ 0.27
CDH20Q9HBT6 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.76■□□□□ 0.27
CDH20Q9HBT6 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CDH20Q9HBT6 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.76■□□□□ 0.27
CDH20Q9HBT6 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.76■□□□□ 0.27
CDH20Q9HBT6 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.76■□□□□ 0.27
CDH20Q9HBT6 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDH20Q9HBT6 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
CDH20Q9HBT6 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDH20Q9HBT6 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.75■□□□□ 0.27
CDH20Q9HBT6 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms