Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMEM56-RWDD3S4R434 MOK-233ENST00000524214 1539 ntTSL 2 BASIC15.75■□□□□ 0.11
TMEM56-RWDD3S4R434 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMEM56-RWDD3S4R434 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.75■□□□□ 0.11
TMEM56-RWDD3S4R434 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TMEM56-RWDD3S4R434 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMEM56-RWDD3S4R434 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMEM56-RWDD3S4R434 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMEM56-RWDD3S4R434 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TMEM56-RWDD3S4R434 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
TMEM56-RWDD3S4R434 BET1L-204ENST00000410108 637 ntTSL 3 BASIC15.75■□□□□ 0.11
TMEM56-RWDD3S4R434 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC15.75■□□□□ 0.11
TMEM56-RWDD3S4R434 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC15.75■□□□□ 0.11
TMEM56-RWDD3S4R434 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC15.75■□□□□ 0.11
TMEM56-RWDD3S4R434 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC15.75■□□□□ 0.11
TMEM56-RWDD3S4R434 NTF6G-201ENST00000591094 616 ntBASIC15.75■□□□□ 0.11
TMEM56-RWDD3S4R434 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMEM56-RWDD3S4R434 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TMEM56-RWDD3S4R434 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TMEM56-RWDD3S4R434 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TMEM56-RWDD3S4R434 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC15.75■□□□□ 0.11
TMEM56-RWDD3S4R434 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMEM56-RWDD3S4R434 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMEM56-RWDD3S4R434 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TMEM56-RWDD3S4R434 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TMEM56-RWDD3S4R434 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM56-RWDD3S4R434 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM56-RWDD3S4R434 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM56-RWDD3S4R434 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
TMEM56-RWDD3S4R434 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM56-RWDD3S4R434 AC020763.4-201ENST00000623414 4170 ntBASIC15.74■□□□□ 0.11
TMEM56-RWDD3S4R434 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC15.74■□□□□ 0.11
TMEM56-RWDD3S4R434 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
TMEM56-RWDD3S4R434 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM56-RWDD3S4R434 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM56-RWDD3S4R434 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC15.74■□□□□ 0.11
TMEM56-RWDD3S4R434 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.74■□□□□ 0.11
TMEM56-RWDD3S4R434 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM56-RWDD3S4R434 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
TMEM56-RWDD3S4R434 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM56-RWDD3S4R434 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM56-RWDD3S4R434 DUX4L16-201ENST00000555130 1264 ntBASIC15.74■□□□□ 0.11
TMEM56-RWDD3S4R434 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC15.74■□□□□ 0.11
TMEM56-RWDD3S4R434 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC15.74■□□□□ 0.11
TMEM56-RWDD3S4R434 AC008694.1-202ENST00000636953 945 ntBASIC15.74■□□□□ 0.11
TMEM56-RWDD3S4R434 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM56-RWDD3S4R434 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
TMEM56-RWDD3S4R434 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM56-RWDD3S4R434 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC15.74■□□□□ 0.11
TMEM56-RWDD3S4R434 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM56-RWDD3S4R434 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM56-RWDD3S4R434 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.74■□□□□ 0.11
TMEM56-RWDD3S4R434 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.74■□□□□ 0.11
TMEM56-RWDD3S4R434 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.74■□□□□ 0.11
TMEM56-RWDD3S4R434 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM56-RWDD3S4R434 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
TMEM56-RWDD3S4R434 AC018470.1-201ENST00000624790 3129 ntBASIC15.74■□□□□ 0.11
TMEM56-RWDD3S4R434 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.74■□□□□ 0.11
TMEM56-RWDD3S4R434 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TMEM56-RWDD3S4R434 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.73■□□□□ 0.11
TMEM56-RWDD3S4R434 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC15.73■□□□□ 0.11
TMEM56-RWDD3S4R434 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.73■□□□□ 0.11
TMEM56-RWDD3S4R434 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM56-RWDD3S4R434 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.73■□□□□ 0.11
TMEM56-RWDD3S4R434 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM56-RWDD3S4R434 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TMEM56-RWDD3S4R434 CYP2T1P-201ENST00000432607 1285 ntBASIC15.73■□□□□ 0.11
TMEM56-RWDD3S4R434 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM56-RWDD3S4R434 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM56-RWDD3S4R434 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TMEM56-RWDD3S4R434 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
TMEM56-RWDD3S4R434 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM56-RWDD3S4R434 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.73■□□□□ 0.11
TMEM56-RWDD3S4R434 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC15.73■□□□□ 0.11
TMEM56-RWDD3S4R434 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.73■□□□□ 0.11
TMEM56-RWDD3S4R434 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM56-RWDD3S4R434 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM56-RWDD3S4R434 UBQLN4P1-201ENST00000461599 1801 ntBASIC15.73■□□□□ 0.11
TMEM56-RWDD3S4R434 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM56-RWDD3S4R434 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TMEM56-RWDD3S4R434 AL133373.2-201ENST00000623187 2828 ntBASIC15.72■□□□□ 0.11
TMEM56-RWDD3S4R434 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
TMEM56-RWDD3S4R434 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TMEM56-RWDD3S4R434 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM56-RWDD3S4R434 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM56-RWDD3S4R434 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM56-RWDD3S4R434 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC15.72■□□□□ 0.11
TMEM56-RWDD3S4R434 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM56-RWDD3S4R434 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM56-RWDD3S4R434 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM56-RWDD3S4R434 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
TMEM56-RWDD3S4R434 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM56-RWDD3S4R434 AC010980.2-201ENST00000587099 1412 ntBASIC15.72■□□□□ 0.11
TMEM56-RWDD3S4R434 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TMEM56-RWDD3S4R434 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM56-RWDD3S4R434 NME1-207ENST00000480143 964 ntTSL 2 BASIC15.72■□□□□ 0.11
TMEM56-RWDD3S4R434 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TMEM56-RWDD3S4R434 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TMEM56-RWDD3S4R434 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC15.72■□□□□ 0.11
TMEM56-RWDD3S4R434 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms