Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VPS25Q9BRG1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
VPS25Q9BRG1 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC13.5□□□□□ -0.25
VPS25Q9BRG1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC13.5□□□□□ -0.25
VPS25Q9BRG1 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VPS25Q9BRG1 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC13.5□□□□□ -0.25
VPS25Q9BRG1 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
VPS25Q9BRG1 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 Z82202.1-201ENST00000623446 1880 ntBASIC13.49□□□□□ -0.25
VPS25Q9BRG1 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 AP006261.1-201ENST00000584783 668 ntBASIC13.49□□□□□ -0.25
VPS25Q9BRG1 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 AC008741.2-201ENST00000612792 3115 ntBASIC13.49□□□□□ -0.25
VPS25Q9BRG1 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 CD37-213ENST00000598095 1598 ntTSL 2 BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
VPS25Q9BRG1 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.49□□□□□ -0.25
VPS25Q9BRG1 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
VPS25Q9BRG1 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC13.48□□□□□ -0.25
VPS25Q9BRG1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
VPS25Q9BRG1 AD000864.1-201ENST00000624076 2295 ntBASIC13.48□□□□□ -0.25
VPS25Q9BRG1 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VPS25Q9BRG1 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VPS25Q9BRG1 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VPS25Q9BRG1 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
VPS25Q9BRG1 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VPS25Q9BRG1 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
VPS25Q9BRG1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC13.48□□□□□ -0.25
VPS25Q9BRG1 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC13.48□□□□□ -0.25
VPS25Q9BRG1 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
VPS25Q9BRG1 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
VPS25Q9BRG1 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
VPS25Q9BRG1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VPS25Q9BRG1 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC13.48□□□□□ -0.25
VPS25Q9BRG1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VPS25Q9BRG1 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
VPS25Q9BRG1 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC13.48□□□□□ -0.25
VPS25Q9BRG1 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VPS25Q9BRG1 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC13.48□□□□□ -0.25
VPS25Q9BRG1 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
VPS25Q9BRG1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VPS25Q9BRG1 AC023824.1-201ENST00000562945 2975 ntBASIC13.48□□□□□ -0.25
VPS25Q9BRG1 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VPS25Q9BRG1 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VPS25Q9BRG1 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
VPS25Q9BRG1 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
VPS25Q9BRG1 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VPS25Q9BRG1 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
VPS25Q9BRG1 AC090164.3-201ENST00000610780 2143 ntBASIC13.48□□□□□ -0.25
VPS25Q9BRG1 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
VPS25Q9BRG1 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VPS25Q9BRG1 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
VPS25Q9BRG1 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VPS25Q9BRG1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
VPS25Q9BRG1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC13.47□□□□□ -0.25
VPS25Q9BRG1 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
VPS25Q9BRG1 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
VPS25Q9BRG1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
VPS25Q9BRG1 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms