RNA–Protein interactions for RNA: ENST00000397223.4

FOXRED2-203, Transcript of FAD dependent oxidoreductase domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXRED2, Length 2,184 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED2-203ENST00000397223 NISCHQ9Y2I1 1504 aa39■■■■□ 3.83
FOXRED2-203ENST00000397223 CCDC180Q9P1Z9 1646 aa34.01■■■■□ 3.03
FOXRED2-203ENST00000397223 ZCCHC6Q5VYS8 1495 aaKnown RBP32.7■■■□□ 2.83
FOXRED2-203ENST00000397223 ABCC9O60706 1549 aa32.67■■■□□ 2.82
FOXRED2-203ENST00000397223 DCAF8L2P0C7V8 631 aa32.52■■■□□ 2.8
FOXRED2-203ENST00000397223 DCAF1Q9Y4B6 1507 aa32.08■■■□□ 2.73
FOXRED2-203ENST00000397223 SHROOM4Q9ULL8 1493 aa31.9■■■□□ 2.7
FOXRED2-203ENST00000397223 MYO15BQ96JP2 1530 aa31.76■■■□□ 2.67
FOXRED2-203ENST00000397223 NACADO15069 1562 aa31.74■■■□□ 2.67
FOXRED2-203ENST00000397223 RB1CC1Q8TDY2 1594 aa31.57■■■□□ 2.64
FOXRED2-203ENST00000397223 SCRIBQ14160 1630 aa31.47■■■□□ 2.63
FOXRED2-203ENST00000397223 UNC13AQ9UPW8 1703 aa31.13■■■□□ 2.57
FOXRED2-203ENST00000397223 PABPN1Q86U42 306 aaKnown RBP eCLIP30.82■■■□□ 2.52
FOXRED2-203ENST00000397223 BICRAQ9NZM4 1560 aa30.78■■■□□ 2.52
FOXRED2-203ENST00000397223 SUPT5HO00267 1087 aaKnown RBP30.5■■■□□ 2.47
FOXRED2-203ENST00000397223 CECR2Q9BXF3 1484 aa30.49■■■□□ 2.47
FOXRED2-203ENST00000397223 MROH2BQ7Z745 1585 aa30.23■■■□□ 2.43
FOXRED2-203ENST00000397223 RSF1Q96T23 1441 aaPredicted RBP30.21■■■□□ 2.43
FOXRED2-203ENST00000397223 BAZ1AQ9NRL2 1556 aaPredicted RBP30.07■■■□□ 2.4
FOXRED2-203ENST00000397223 SMARCA4P51532 1647 aa30.05■■■□□ 2.4
FOXRED2-203ENST00000397223 WIZO95785 1651 aa30■■■□□ 2.39
FOXRED2-203ENST00000397223 EIF4G1Q04637 1599 aaKnown RBP29.83■■■□□ 2.37
FOXRED2-203ENST00000397223 ATAD2BQ9ULI0 1458 aa29.63■■■□□ 2.33
FOXRED2-203ENST00000397223 PEG3Q9GZU2 1588 aa29.6■■■□□ 2.33
FOXRED2-203ENST00000397223 TOP2AP11388 1531 aaKnown RBP29.51■■■□□ 2.32
FOXRED2-203ENST00000397223 CC2D2AQ9P2K1 1620 aa29.5■■■□□ 2.31
FOXRED2-203ENST00000397223 SMARCA2P51531 1590 aa29.49■■■□□ 2.31
FOXRED2-203ENST00000397223 BAZ1BQ9UIG0 1483 aaKnown RBP29.43■■■□□ 2.3
FOXRED2-203ENST00000397223 NCAPD3P42695 1498 aa29.34■■■□□ 2.29
FOXRED2-203ENST00000397223 CCDC88BA6NC98 1476 aa29.3■■■□□ 2.28
FOXRED2-203ENST00000397223 HMGXB3Q12766 1538 aa29.25■■■□□ 2.27
FOXRED2-203ENST00000397223 DNAJC5BQ9UF47 199 aa29.19■■■□□ 2.26
FOXRED2-203ENST00000397223 CHIC1Q5VXU3 224 aa28.98■■■□□ 2.23
FOXRED2-203ENST00000397223 ABCC8Q09428 1581 aa28.71■■■□□ 2.19
FOXRED2-203ENST00000397223 CFTRP13569 1480 aa28.66■■■□□ 2.18
FOXRED2-203ENST00000397223 NESP48681 1621 aa28.65■■■□□ 2.18
FOXRED2-203ENST00000397223 CADPSQ9ULU8 1353 aa28.61■■■□□ 2.17
FOXRED2-203ENST00000397223 TRIM41Q8WV44 630 aa28.56■■■□□ 2.16
FOXRED2-203ENST00000397223 PRDM2Q13029 1718 aa28.46■■■□□ 2.15
FOXRED2-203ENST00000397223 WRNQ14191 1432 aaPredicted RBP eCLIP28.4■■■□□ 2.14
FOXRED2-203ENST00000397223 SYNJ1O43426 1573 aa28.39■■■□□ 2.13
FOXRED2-203ENST00000397223 LAMC3Q9Y6N6 1575 aa28.37■■■□□ 2.13
FOXRED2-203ENST00000397223 FANCD2Q9BXW9 1451 aa28.34■■■□□ 2.13
FOXRED2-203ENST00000397223 CUX1P39880 1505 aa28.25■■■□□ 2.11
FOXRED2-203ENST00000397223 KIF21AQ7Z4S6 1674 aa28.23■■■□□ 2.11
FOXRED2-203ENST00000397223 FAM9AQ8IZU1 332 aaPredicted RBP28.23■■■□□ 2.11
FOXRED2-203ENST00000397223 TOP2BQ02880 1626 aa28.18■■■□□ 2.1
FOXRED2-203ENST00000397223 PDS5BQ9NTI5 1447 aa28.16■■■□□ 2.1
FOXRED2-203ENST00000397223 BIVM-ERCC5R4GMW8 1640 aa28.15■■■□□ 2.1
FOXRED2-203ENST00000397223 CEP164Q9UPV0 1460 aa28.14■■■□□ 2.1
FOXRED2-203ENST00000397223 SOGA1O94964 1423 aa28.09■■■□□ 2.09
FOXRED2-203ENST00000397223 RUSC2Q8N2Y8 1516 aa28.07■■■□□ 2.08
FOXRED2-203ENST00000397223 URB2Q14146 1524 aaKnown RBP28.05■■■□□ 2.08
FOXRED2-203ENST00000397223 LOC105371045A0A1W2PR82 267 aa28.01■■■□□ 2.07
FOXRED2-203ENST00000397223 TOPBP1Q92547 1522 aa28■■■□□ 2.07
FOXRED2-203ENST00000397223 EHMT2Q96KQ7 1210 aa27.98■■■□□ 2.07
FOXRED2-203ENST00000397223 DNMBPQ6XZF7 1577 aa27.97■■■□□ 2.07
FOXRED2-203ENST00000397223 FGD5Q6ZNL6 1462 aa27.97■■■□□ 2.07
FOXRED2-203ENST00000397223 ERCC6Q03468 1493 aa27.92■■■□□ 2.06
FOXRED2-203ENST00000397223 POLA1P09884 1462 aaPredicted RBP27.87■■■□□ 2.05
FOXRED2-203ENST00000397223 RAD54L2Q9Y4B4 1467 aa27.86■■■□□ 2.05
FOXRED2-203ENST00000397223 MRC2Q9UBG0 1479 aa27.85■■■□□ 2.05
FOXRED2-203ENST00000397223 THOC2Q8NI27 1593 aaKnown RBP27.78■■■□□ 2.04
FOXRED2-203ENST00000397223 CSRNP3Q8WYN3 585 aa27.73■■■□□ 2.03
FOXRED2-203ENST00000397223 CUX2O14529 1486 aa27.73■■■□□ 2.03
FOXRED2-203ENST00000397223 WDR62O43379 1518 aa27.73■■■□□ 2.03
FOXRED2-203ENST00000397223 EEA1Q15075 1411 aa27.67■■■□□ 2.02
FOXRED2-203ENST00000397223 KIF27Q86VH2 1401 aa27.64■■■□□ 2.02
FOXRED2-203ENST00000397223 ABCA10Q8WWZ4 1543 aa27.63■■■□□ 2.01
FOXRED2-203ENST00000397223 WDR97A6NE52 1622 aa27.62■■■□□ 2.01
FOXRED2-203ENST00000397223 TARBP1Q13395 1621 aaKnown RBP27.62■■■□□ 2.01
FOXRED2-203ENST00000397223 HRCP23327 699 aa27.62■■■□□ 2.01
FOXRED2-203ENST00000397223 TDRD9Q8NDG6 1382 aaKnown RBP27.61■■■□□ 2.01
FOXRED2-203ENST00000397223 IGF1RP08069 1367 aa27.52■■■□□ 2
FOXRED2-203ENST00000397223 ZNF608Q9ULD9 1512 aaPredicted RBP27.5■■□□□ 1.99
FOXRED2-203ENST00000397223 RAPGEF2Q9Y4G8 1499 aa27.49■■□□□ 1.99
FOXRED2-203ENST00000397223 AQRO60306 1485 aaKnown RBP eCLIP27.48■■□□□ 1.99
FOXRED2-203ENST00000397223 ABCA5Q8WWZ7 1642 aa27.47■■□□□ 1.99
FOXRED2-203ENST00000397223 KIF21BO75037 1637 aa27.45■■□□□ 1.98
FOXRED2-203ENST00000397223 PRXQ9BXM0 1461 aa27.44■■□□□ 1.98
FOXRED2-203ENST00000397223 IFT140Q96RY7 1462 aa27.43■■□□□ 1.98
FOXRED2-203ENST00000397223 GAPVD1Q14C86 1478 aa27.43■■□□□ 1.98
FOXRED2-203ENST00000397223 UBTFP17480 764 aaKnown RBP27.41■■□□□ 1.98
FOXRED2-203ENST00000397223 GOLGA3Q08378 1498 aa27.4■■□□□ 1.98
FOXRED2-203ENST00000397223 CARMIL1Q5VZK9 1371 aa27.35■■□□□ 1.97
FOXRED2-203ENST00000397223 PBRM1Q86U86 1689 aa27.32■■□□□ 1.96
FOXRED2-203ENST00000397223 EIF4G3O43432 1585 aaKnown RBP27.32■■□□□ 1.96
FOXRED2-203ENST00000397223 ERICH3Q5RHP9 1530 aa27.27■■□□□ 1.96
FOXRED2-203ENST00000397223 TNIKQ9UKE5 1360 aa27.27■■□□□ 1.96
FOXRED2-203ENST00000397223 RANGAP1P46060 587 aaPredicted RBP27.25■■□□□ 1.95
FOXRED2-203ENST00000397223 CUL7Q14999 1698 aa27.21■■□□□ 1.95
FOXRED2-203ENST00000397223 GRIN2BQ13224 1484 aa27.2■■□□□ 1.94
FOXRED2-203ENST00000397223 CEP162Q5TB80 1403 aa27.18■■□□□ 1.94
FOXRED2-203ENST00000397223 SNAPC4Q5SXM2 1469 aa27.15■■□□□ 1.94
FOXRED2-203ENST00000397223 ADAMTS12P58397 1594 aa27.13■■□□□ 1.93
FOXRED2-203ENST00000397223 FHAD1B1AJZ9 1412 aa27.06■■□□□ 1.92
FOXRED2-203ENST00000397223 CLIP1P30622 1438 aa27.01■■□□□ 1.91
FOXRED2-203ENST00000397223 FBLN2P98095 1184 aa26.99■■□□□ 1.91
FOXRED2-203ENST00000397223 PCGF6Q9BYE7 350 aa26.99■■□□□ 1.91
FOXRED2-203ENST00000397223 MAGI1Q96QZ7 1491 aaPredicted RBP26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms