RNA–Protein interactions for RNA: ENST00000285689.7

GRAMD2B-201, Transcript of GRAM domain containing 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GRAMD2B, Length 3,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD2B-201ENST00000285689 NISCHQ9Y2I1 1504 aa30.88■■■□□ 2.53
GRAMD2B-201ENST00000285689 SHROOM4Q9ULL8 1493 aa27.37■■□□□ 1.97
GRAMD2B-201ENST00000285689 DCAF8L2P0C7V8 631 aa27.07■■□□□ 1.92
GRAMD2B-201ENST00000285689 SUPT5HO00267 1087 aaKnown RBP26.74■■□□□ 1.87
GRAMD2B-201ENST00000285689 PPARGC1BQ86YN6 1023 aaKnown RBP26.48■■□□□ 1.83
GRAMD2B-201ENST00000285689 HRCP23327 699 aa26.37■■□□□ 1.81
GRAMD2B-201ENST00000285689 PCGF6Q9BYE7 350 aa26.17■■□□□ 1.78
GRAMD2B-201ENST00000285689 ZCCHC6Q5VYS8 1495 aaKnown RBP25.98■■□□□ 1.75
GRAMD2B-201ENST00000285689 CCDC180Q9P1Z9 1646 aa25.84■■□□□ 1.73
GRAMD2B-201ENST00000285689 PELP1Q8IZL8 1130 aaKnown RBP25.6■■□□□ 1.69
GRAMD2B-201ENST00000285689 SCAF1Q9H7N4 1312 aaKnown RBP25.41■■□□□ 1.66
GRAMD2B-201ENST00000285689 CHIC1Q5VXU3 224 aa25.36■■□□□ 1.65
GRAMD2B-201ENST00000285689 MYO15BQ96JP2 1530 aa25.3■■□□□ 1.64
GRAMD2B-201ENST00000285689 ABCC9O60706 1549 aa25.23■■□□□ 1.63
GRAMD2B-201ENST00000285689 EHMT2Q96KQ7 1210 aa25.17■■□□□ 1.62
GRAMD2B-201ENST00000285689 LOC105371045A0A1W2PR82 267 aa25.07■■□□□ 1.6
GRAMD2B-201ENST00000285689 SCRIBQ14160 1630 aa25.05■■□□□ 1.6
GRAMD2B-201ENST00000285689 FAM9AQ8IZU1 332 aaPredicted RBP24.91■■□□□ 1.58
GRAMD2B-201ENST00000285689 DCAF1Q9Y4B6 1507 aa24.78■■□□□ 1.56
GRAMD2B-201ENST00000285689 TRIM26Q12899 539 aaPredicted RBP24.67■■□□□ 1.54
GRAMD2B-201ENST00000285689 NEUROD1Q13562 356 aa24.64■■□□□ 1.54
GRAMD2B-201ENST00000285689 GTF3C3Q9Y5Q9 886 aa24.6■■□□□ 1.53
GRAMD2B-201ENST00000285689 RSF1Q96T23 1441 aaPredicted RBP24.57■■□□□ 1.52
GRAMD2B-201ENST00000285689 TRIM41Q8WV44 630 aa24.56■■□□□ 1.52
GRAMD2B-201ENST00000285689 CECR2Q9BXF3 1484 aa24.53■■□□□ 1.52
GRAMD2B-201ENST00000285689 MYT1Q01538 1121 aa24.51■■□□□ 1.51
GRAMD2B-201ENST00000285689 ACIN1Q9UKV3 1341 aaKnown RBP24.49■■□□□ 1.51
GRAMD2B-201ENST00000285689 PABPN1Q86U42 306 aaKnown RBP eCLIP24.44■■□□□ 1.5
GRAMD2B-201ENST00000285689 RB1CC1Q8TDY2 1594 aa24.37■■□□□ 1.49
GRAMD2B-201ENST00000285689 ZEB1P37275 1124 aaPredicted RBP24.33■■□□□ 1.49
GRAMD2B-201ENST00000285689 MROH2BQ7Z745 1585 aa24.25■■□□□ 1.47
GRAMD2B-201ENST00000285689 YTHDC1Q96MU7 727 aaKnown RBP24.25■■□□□ 1.47
GRAMD2B-201ENST00000285689 TTBK1Q5TCY1 1321 aaPredicted RBP24.2■■□□□ 1.46
GRAMD2B-201ENST00000285689 NACADO15069 1562 aa24.15■■□□□ 1.46
GRAMD2B-201ENST00000285689 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.14■■□□□ 1.46
GRAMD2B-201ENST00000285689 WIZO95785 1651 aa24.12■■□□□ 1.45
GRAMD2B-201ENST00000285689 CENPBP07199 599 aaPredicted RBP24.1■■□□□ 1.45
GRAMD2B-201ENST00000285689 DIEXFQ68CQ4 756 aaKnown RBP24.01■■□□□ 1.43
GRAMD2B-201ENST00000285689 CCER1Q8TC90 406 aaPredicted RBP23.97■■□□□ 1.43
GRAMD2B-201ENST00000285689 RANGAP1P46060 587 aaPredicted RBP23.8■■□□□ 1.4
GRAMD2B-201ENST00000285689 ABCC8Q09428 1581 aa23.74■■□□□ 1.39
GRAMD2B-201ENST00000285689 BCL11AQ9H165 835 aa23.67■■□□□ 1.38
GRAMD2B-201ENST00000285689 BAZ1AQ9NRL2 1556 aaPredicted RBP23.66■■□□□ 1.38
GRAMD2B-201ENST00000285689 CCDC88BA6NC98 1476 aa23.62■■□□□ 1.37
GRAMD2B-201ENST00000285689 UNC13AQ9UPW8 1703 aa23.6■■□□□ 1.37
GRAMD2B-201ENST00000285689 UBTFP17480 764 aaKnown RBP23.6■■□□□ 1.37
GRAMD2B-201ENST00000285689 SMARCA4P51532 1647 aa23.53■■□□□ 1.36
GRAMD2B-201ENST00000285689 SOGA1O94964 1423 aa23.51■■□□□ 1.35
GRAMD2B-201ENST00000285689 MIER1Q8N108 512 aa23.46■■□□□ 1.35
GRAMD2B-201ENST00000285689 RUSC2Q8N2Y8 1516 aa23.46■■□□□ 1.35
GRAMD2B-201ENST00000285689 TOP2AP11388 1531 aaKnown RBP23.4■■□□□ 1.34
GRAMD2B-201ENST00000285689 SMARCA2P51531 1590 aa23.39■■□□□ 1.33
GRAMD2B-201ENST00000285689 BICRAQ9NZM4 1560 aa23.38■■□□□ 1.33
GRAMD2B-201ENST00000285689 CSRNP3Q8WYN3 585 aa23.3■■□□□ 1.32
GRAMD2B-201ENST00000285689 ZNF316A6NFI3 1004 aaPredicted RBP23.28■■□□□ 1.32
GRAMD2B-201ENST00000285689 ANP32EQ9BTT0 268 aa23.26■■□□□ 1.31
GRAMD2B-201ENST00000285689 EIF4G1Q04637 1599 aaKnown RBP23.21■■□□□ 1.31
GRAMD2B-201ENST00000285689 BCANQ96GW7 911 aa23.19■■□□□ 1.3
GRAMD2B-201ENST00000285689 WRNQ14191 1432 aaPredicted RBP eCLIP23.15■■□□□ 1.3
GRAMD2B-201ENST00000285689 CEP162Q5TB80 1403 aa23.15■■□□□ 1.3
GRAMD2B-201ENST00000285689 BAZ1BQ9UIG0 1483 aaKnown RBP23.14■■□□□ 1.29
GRAMD2B-201ENST00000285689 TSHZ2Q9NRE2 1034 aa23.12■■□□□ 1.29
GRAMD2B-201ENST00000285689 ATAD2BQ9ULI0 1458 aa23.12■■□□□ 1.29
GRAMD2B-201ENST00000285689 HNRNPUL2Q1KMD3 747 aaKnown RBP23.11■■□□□ 1.29
GRAMD2B-201ENST00000285689 SUPT16HQ9Y5B9 1047 aaKnown RBP23.11■■□□□ 1.29
GRAMD2B-201ENST00000285689 SYNJ1O43426 1573 aa22.98■■□□□ 1.27
GRAMD2B-201ENST00000285689 PRKCSHP14314 528 aaPredicted RBP22.93■■□□□ 1.26
GRAMD2B-201ENST00000285689 TNIKQ9UKE5 1360 aa22.89■■□□□ 1.26
GRAMD2B-201ENST00000285689 APLP2Q06481 763 aa22.87■■□□□ 1.25
GRAMD2B-201ENST00000285689 RAPGEF2Q9Y4G8 1499 aa22.83■■□□□ 1.25
GRAMD2B-201ENST00000285689 GOLGA3Q08378 1498 aa22.83■■□□□ 1.25
GRAMD2B-201ENST00000285689 ITGAEP38570 1179 aa22.79■■□□□ 1.24
GRAMD2B-201ENST00000285689 CLIP1P30622 1438 aa22.78■■□□□ 1.24
GRAMD2B-201ENST00000285689 ATP1B4Q9UN42 357 aaPredicted RBP22.74■■□□□ 1.23
GRAMD2B-201ENST00000285689 P3H3Q8IVL6 736 aa22.71■■□□□ 1.23
GRAMD2B-201ENST00000285689 PEG3Q9GZU2 1588 aa22.7■■□□□ 1.23
GRAMD2B-201ENST00000285689 KCNH8Q96L42 1107 aa22.69■■□□□ 1.22
GRAMD2B-201ENST00000285689 EEA1Q15075 1411 aa22.68■■□□□ 1.22
GRAMD2B-201ENST00000285689 CEP164Q9UPV0 1460 aa22.67■■□□□ 1.22
GRAMD2B-201ENST00000285689 FKBP8Q14318 412 aa22.65■■□□□ 1.22
GRAMD2B-201ENST00000285689 DNAJC5BQ9UF47 199 aa22.62■■□□□ 1.21
GRAMD2B-201ENST00000285689 KANK4Q5T7N3 995 aaPredicted RBP22.61■■□□□ 1.21
GRAMD2B-201ENST00000285689 RBM19Q9Y4C8 960 aaKnown RBP22.58■■□□□ 1.21
GRAMD2B-201ENST00000285689 CUX1P39880 1505 aa22.51■■□□□ 1.19
GRAMD2B-201ENST00000285689 NCAPD3P42695 1498 aa22.5■■□□□ 1.19
GRAMD2B-201ENST00000285689 VPS8Q8N3P4 1428 aa22.46■■□□□ 1.19
GRAMD2B-201ENST00000285689 MSH5O43196 834 aa22.45■■□□□ 1.18
GRAMD2B-201ENST00000285689 ERICH6Q7L0X2 663 aa22.45■■□□□ 1.18
GRAMD2B-201ENST00000285689 TOP2BQ02880 1626 aa22.44■■□□□ 1.18
GRAMD2B-201ENST00000285689 CUX2O14529 1486 aa22.42■■□□□ 1.18
GRAMD2B-201ENST00000285689 KIF21BO75037 1637 aa22.41■■□□□ 1.18
GRAMD2B-201ENST00000285689 ANO8Q9HCE9 1232 aaPredicted RBP22.4■■□□□ 1.18
GRAMD2B-201ENST00000285689 KIF27Q86VH2 1401 aa22.39■■□□□ 1.18
GRAMD2B-201ENST00000285689 NESP48681 1621 aa22.37■■□□□ 1.17
GRAMD2B-201ENST00000285689 CFTRP13569 1480 aa22.35■■□□□ 1.17
GRAMD2B-201ENST00000285689 TRIM52Q96A61 297 aa22.34■■□□□ 1.17
GRAMD2B-201ENST00000285689 ARAP1Q96P48 1450 aa22.33■■□□□ 1.17
GRAMD2B-201ENST00000285689 IRX6P78412 446 aaPredicted RBP22.32■■□□□ 1.16
GRAMD2B-201ENST00000285689 CADPSQ9ULU8 1353 aa22.32■■□□□ 1.16
GRAMD2B-201ENST00000285689 ARID3CA6NKF2 412 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms