Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.6■□□□□ 0.57
NIPAL1Q6NVV3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
NIPAL1Q6NVV3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NIPAL1Q6NVV3 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.6■□□□□ 0.57
NIPAL1Q6NVV3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.6■□□□□ 0.57
NIPAL1Q6NVV3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NIPAL1Q6NVV3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NIPAL1Q6NVV3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
NIPAL1Q6NVV3 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NIPAL1Q6NVV3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NIPAL1Q6NVV3 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.59■□□□□ 0.57
NIPAL1Q6NVV3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NIPAL1Q6NVV3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NIPAL1Q6NVV3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NIPAL1Q6NVV3 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NIPAL1Q6NVV3 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NIPAL1Q6NVV3 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
NIPAL1Q6NVV3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.59■□□□□ 0.57
NIPAL1Q6NVV3 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
NIPAL1Q6NVV3 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NIPAL1Q6NVV3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.59■□□□□ 0.57
NIPAL1Q6NVV3 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.59■□□□□ 0.57
NIPAL1Q6NVV3 RARRES2P10-201ENST00000564312 460 ntBASIC18.59■□□□□ 0.57
NIPAL1Q6NVV3 AC020916.1-201ENST00000587762 1774 ntBASIC18.59■□□□□ 0.57
NIPAL1Q6NVV3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
NIPAL1Q6NVV3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.59■□□□□ 0.57
NIPAL1Q6NVV3 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NIPAL1Q6NVV3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NIPAL1Q6NVV3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NIPAL1Q6NVV3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NIPAL1Q6NVV3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NIPAL1Q6NVV3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
NIPAL1Q6NVV3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.58■□□□□ 0.57
NIPAL1Q6NVV3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
NIPAL1Q6NVV3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
NIPAL1Q6NVV3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.58■□□□□ 0.57
NIPAL1Q6NVV3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
NIPAL1Q6NVV3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NIPAL1Q6NVV3 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NIPAL1Q6NVV3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NIPAL1Q6NVV3 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NIPAL1Q6NVV3 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NIPAL1Q6NVV3 AL158047.1-201ENST00000445918 881 ntBASIC18.58■□□□□ 0.56
NIPAL1Q6NVV3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.58■□□□□ 0.56
NIPAL1Q6NVV3 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
NIPAL1Q6NVV3 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.58■□□□□ 0.56
NIPAL1Q6NVV3 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
NIPAL1Q6NVV3 AP001412.1-201ENST00000608405 714 ntBASIC18.58■□□□□ 0.56
NIPAL1Q6NVV3 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NIPAL1Q6NVV3 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NIPAL1Q6NVV3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
NIPAL1Q6NVV3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.58■□□□□ 0.56
NIPAL1Q6NVV3 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
NIPAL1Q6NVV3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
NIPAL1Q6NVV3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.57■□□□□ 0.56
NIPAL1Q6NVV3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
NIPAL1Q6NVV3 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.57■□□□□ 0.56
NIPAL1Q6NVV3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.57■□□□□ 0.56
NIPAL1Q6NVV3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NIPAL1Q6NVV3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NIPAL1Q6NVV3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
NIPAL1Q6NVV3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NIPAL1Q6NVV3 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.57■□□□□ 0.56
NIPAL1Q6NVV3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
NIPAL1Q6NVV3 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
NIPAL1Q6NVV3 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.57■□□□□ 0.56
NIPAL1Q6NVV3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.57■□□□□ 0.56
NIPAL1Q6NVV3 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NIPAL1Q6NVV3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
NIPAL1Q6NVV3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.57■□□□□ 0.56
NIPAL1Q6NVV3 LTB4R2-202ENST00000528054 3092 ntBASIC18.57■□□□□ 0.56
NIPAL1Q6NVV3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.57■□□□□ 0.56
NIPAL1Q6NVV3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
NIPAL1Q6NVV3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.57■□□□□ 0.56
NIPAL1Q6NVV3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
NIPAL1Q6NVV3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
NIPAL1Q6NVV3 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.57■□□□□ 0.56
NIPAL1Q6NVV3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NIPAL1Q6NVV3 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NIPAL1Q6NVV3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NIPAL1Q6NVV3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NIPAL1Q6NVV3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NIPAL1Q6NVV3 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NIPAL1Q6NVV3 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NIPAL1Q6NVV3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NIPAL1Q6NVV3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NIPAL1Q6NVV3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NIPAL1Q6NVV3 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NIPAL1Q6NVV3 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NIPAL1Q6NVV3 MIR718-201ENST00000390190 70 ntBASIC18.56■□□□□ 0.56
NIPAL1Q6NVV3 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.56■□□□□ 0.56
NIPAL1Q6NVV3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
NIPAL1Q6NVV3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
NIPAL1Q6NVV3 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NIPAL1Q6NVV3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.56■□□□□ 0.56
NIPAL1Q6NVV3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.56■□□□□ 0.56
NIPAL1Q6NVV3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.56■□□□□ 0.56
NIPAL1Q6NVV3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NIPAL1Q6NVV3 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NIPAL1Q6NVV3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 345.8 ms