Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CDH20Q9HBT6 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CDH20Q9HBT6 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH20Q9HBT6 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CDH20Q9HBT6 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH20Q9HBT6 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
CDH20Q9HBT6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CDH20Q9HBT6 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.95■□□□□ 0.3
CDH20Q9HBT6 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH20Q9HBT6 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC16.95■□□□□ 0.3
CDH20Q9HBT6 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.95■□□□□ 0.3
CDH20Q9HBT6 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH20Q9HBT6 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH20Q9HBT6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CDH20Q9HBT6 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH20Q9HBT6 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH20Q9HBT6 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CDH20Q9HBT6 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
CDH20Q9HBT6 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH20Q9HBT6 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDH20Q9HBT6 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDH20Q9HBT6 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH20Q9HBT6 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH20Q9HBT6 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH20Q9HBT6 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH20Q9HBT6 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.94■□□□□ 0.3
CDH20Q9HBT6 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC16.94■□□□□ 0.3
CDH20Q9HBT6 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.94■□□□□ 0.3
CDH20Q9HBT6 UBE2SP1-201ENST00000450587 669 ntBASIC16.94■□□□□ 0.3
CDH20Q9HBT6 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH20Q9HBT6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.94■□□□□ 0.3
CDH20Q9HBT6 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.94■□□□□ 0.3
CDH20Q9HBT6 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.94■□□□□ 0.3
CDH20Q9HBT6 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.94■□□□□ 0.3
CDH20Q9HBT6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH20Q9HBT6 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CDH20Q9HBT6 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.94■□□□□ 0.3
CDH20Q9HBT6 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CDH20Q9HBT6 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.94■□□□□ 0.3
CDH20Q9HBT6 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.94■□□□□ 0.3
CDH20Q9HBT6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDH20Q9HBT6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDH20Q9HBT6 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
CDH20Q9HBT6 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH20Q9HBT6 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH20Q9HBT6 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH20Q9HBT6 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH20Q9HBT6 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH20Q9HBT6 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.93■□□□□ 0.3
CDH20Q9HBT6 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH20Q9HBT6 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CDH20Q9HBT6 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH20Q9HBT6 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC16.93■□□□□ 0.3
CDH20Q9HBT6 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.93■□□□□ 0.3
CDH20Q9HBT6 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.93■□□□□ 0.3
CDH20Q9HBT6 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.93■□□□□ 0.3
CDH20Q9HBT6 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CDH20Q9HBT6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH20Q9HBT6 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH20Q9HBT6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH20Q9HBT6 KRT8P8-201ENST00000434750 1448 ntBASIC16.93■□□□□ 0.3
CDH20Q9HBT6 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDH20Q9HBT6 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH20Q9HBT6 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH20Q9HBT6 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
CDH20Q9HBT6 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH20Q9HBT6 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDH20Q9HBT6 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.93■□□□□ 0.3
CDH20Q9HBT6 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH20Q9HBT6 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.92■□□□□ 0.3
CDH20Q9HBT6 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDH20Q9HBT6 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDH20Q9HBT6 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDH20Q9HBT6 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.92■□□□□ 0.3
CDH20Q9HBT6 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH20Q9HBT6 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH20Q9HBT6 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH20Q9HBT6 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.92■□□□□ 0.3
CDH20Q9HBT6 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH20Q9HBT6 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH20Q9HBT6 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH20Q9HBT6 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.92■□□□□ 0.3
CDH20Q9HBT6 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH20Q9HBT6 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDH20Q9HBT6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDH20Q9HBT6 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.92■□□□□ 0.3
CDH20Q9HBT6 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH20Q9HBT6 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDH20Q9HBT6 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDH20Q9HBT6 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH20Q9HBT6 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH20Q9HBT6 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH20Q9HBT6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH20Q9HBT6 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.91■□□□□ 0.3
CDH20Q9HBT6 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH20Q9HBT6 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDH20Q9HBT6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CDH20Q9HBT6 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDH20Q9HBT6 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.91■□□□□ 0.3
CDH20Q9HBT6 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms