Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRGV1A0A0A0MS02 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRGV1A0A0A0MS02 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRGV1A0A0A0MS02 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRGV1A0A0A0MS02 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRGV1A0A0A0MS02 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC14.08□□□□□ -0.16
TRGV1A0A0A0MS02 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRGV1A0A0A0MS02 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRGV1A0A0A0MS02 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRGV1A0A0A0MS02 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TRGV1A0A0A0MS02 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRGV1A0A0A0MS02 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRGV1A0A0A0MS02 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC14.08□□□□□ -0.16
TRGV1A0A0A0MS02 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC14.08□□□□□ -0.16
TRGV1A0A0A0MS02 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC14.08□□□□□ -0.16
TRGV1A0A0A0MS02 SLC29A4P2-201ENST00000504749 1089 ntBASIC14.08□□□□□ -0.16
TRGV1A0A0A0MS02 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRGV1A0A0A0MS02 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC14.08□□□□□ -0.16
TRGV1A0A0A0MS02 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRGV1A0A0A0MS02 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC14.08□□□□□ -0.16
TRGV1A0A0A0MS02 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRGV1A0A0A0MS02 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRGV1A0A0A0MS02 TFP1-202ENST00000475455 1573 ntBASIC14.08□□□□□ -0.16
TRGV1A0A0A0MS02 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRGV1A0A0A0MS02 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRGV1A0A0A0MS02 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC14.08□□□□□ -0.16
TRGV1A0A0A0MS02 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRGV1A0A0A0MS02 AC007952.6-201ENST00000573168 2673 ntBASIC14.08□□□□□ -0.16
TRGV1A0A0A0MS02 AC003957.1-201ENST00000625108 2673 ntBASIC14.08□□□□□ -0.16
TRGV1A0A0A0MS02 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRGV1A0A0A0MS02 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRGV1A0A0A0MS02 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRGV1A0A0A0MS02 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRGV1A0A0A0MS02 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC14.07□□□□□ -0.16
TRGV1A0A0A0MS02 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRGV1A0A0A0MS02 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRGV1A0A0A0MS02 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRGV1A0A0A0MS02 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRGV1A0A0A0MS02 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
TRGV1A0A0A0MS02 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRGV1A0A0A0MS02 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRGV1A0A0A0MS02 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRGV1A0A0A0MS02 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRGV1A0A0A0MS02 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRGV1A0A0A0MS02 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC14.07□□□□□ -0.16
TRGV1A0A0A0MS02 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRGV1A0A0A0MS02 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC14.07□□□□□ -0.16
TRGV1A0A0A0MS02 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRGV1A0A0A0MS02 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC14.07□□□□□ -0.16
TRGV1A0A0A0MS02 RNA5SP413-201ENST00000516373 109 ntBASIC14.07□□□□□ -0.16
TRGV1A0A0A0MS02 MAX-217ENST00000557277 728 ntTSL 3 BASIC14.07□□□□□ -0.16
TRGV1A0A0A0MS02 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRGV1A0A0A0MS02 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRGV1A0A0A0MS02 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC14.07□□□□□ -0.16
TRGV1A0A0A0MS02 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRGV1A0A0A0MS02 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC14.07□□□□□ -0.16
TRGV1A0A0A0MS02 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC14.07□□□□□ -0.16
TRGV1A0A0A0MS02 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRGV1A0A0A0MS02 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRGV1A0A0A0MS02 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRGV1A0A0A0MS02 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
TRGV1A0A0A0MS02 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRGV1A0A0A0MS02 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TRGV1A0A0A0MS02 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRGV1A0A0A0MS02 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRGV1A0A0A0MS02 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRGV1A0A0A0MS02 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRGV1A0A0A0MS02 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC14.07□□□□□ -0.16
TRGV1A0A0A0MS02 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 PNN-205ENST00000556530 601 ntTSL 2 BASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 AC008687.6-201ENST00000596318 630 ntBASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 AC120498.8-201ENST00000614275 531 ntBASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TRGV1A0A0A0MS02 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms