Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC13.58□□□□□ -0.24
VPS25Q9BRG1 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
VPS25Q9BRG1 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VPS25Q9BRG1 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VPS25Q9BRG1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC13.58□□□□□ -0.24
VPS25Q9BRG1 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
VPS25Q9BRG1 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC13.58□□□□□ -0.24
VPS25Q9BRG1 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VPS25Q9BRG1 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VPS25Q9BRG1 PCDH8P1-201ENST00000428983 2773 ntBASIC13.58□□□□□ -0.24
VPS25Q9BRG1 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC13.58□□□□□ -0.24
VPS25Q9BRG1 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VPS25Q9BRG1 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.58□□□□□ -0.24
VPS25Q9BRG1 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VPS25Q9BRG1 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VPS25Q9BRG1 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.58□□□□□ -0.24
VPS25Q9BRG1 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
VPS25Q9BRG1 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VPS25Q9BRG1 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC13.58□□□□□ -0.24
VPS25Q9BRG1 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VPS25Q9BRG1 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
VPS25Q9BRG1 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
VPS25Q9BRG1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC13.57□□□□□ -0.24
VPS25Q9BRG1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
VPS25Q9BRG1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VPS25Q9BRG1 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.57□□□□□ -0.24
VPS25Q9BRG1 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
VPS25Q9BRG1 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
VPS25Q9BRG1 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
VPS25Q9BRG1 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
VPS25Q9BRG1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VPS25Q9BRG1 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
VPS25Q9BRG1 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
VPS25Q9BRG1 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VPS25Q9BRG1 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
VPS25Q9BRG1 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC13.57□□□□□ -0.24
VPS25Q9BRG1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC13.57□□□□□ -0.24
VPS25Q9BRG1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC13.57□□□□□ -0.24
VPS25Q9BRG1 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VPS25Q9BRG1 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.57□□□□□ -0.24
VPS25Q9BRG1 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
VPS25Q9BRG1 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VPS25Q9BRG1 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
VPS25Q9BRG1 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VPS25Q9BRG1 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC13.57□□□□□ -0.24
VPS25Q9BRG1 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
VPS25Q9BRG1 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC13.57□□□□□ -0.24
VPS25Q9BRG1 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VPS25Q9BRG1 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VPS25Q9BRG1 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
VPS25Q9BRG1 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
VPS25Q9BRG1 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
VPS25Q9BRG1 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VPS25Q9BRG1 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VPS25Q9BRG1 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.56□□□□□ -0.24
VPS25Q9BRG1 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VPS25Q9BRG1 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC13.56□□□□□ -0.24
VPS25Q9BRG1 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC13.56□□□□□ -0.24
VPS25Q9BRG1 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC13.56□□□□□ -0.24
VPS25Q9BRG1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
VPS25Q9BRG1 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
VPS25Q9BRG1 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VPS25Q9BRG1 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VPS25Q9BRG1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC13.56□□□□□ -0.24
VPS25Q9BRG1 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VPS25Q9BRG1 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VPS25Q9BRG1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC13.56□□□□□ -0.24
VPS25Q9BRG1 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VPS25Q9BRG1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC13.56□□□□□ -0.24
VPS25Q9BRG1 LINC01960-201ENST00000563759 1884 ntBASIC13.56□□□□□ -0.24
VPS25Q9BRG1 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.56□□□□□ -0.24
VPS25Q9BRG1 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VPS25Q9BRG1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
VPS25Q9BRG1 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VPS25Q9BRG1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC13.56□□□□□ -0.24
VPS25Q9BRG1 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VPS25Q9BRG1 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
VPS25Q9BRG1 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
VPS25Q9BRG1 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
VPS25Q9BRG1 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VPS25Q9BRG1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VPS25Q9BRG1 AL118508.1-201ENST00000613502 2345 ntBASIC13.56□□□□□ -0.24
VPS25Q9BRG1 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC13.56□□□□□ -0.24
VPS25Q9BRG1 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
VPS25Q9BRG1 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VPS25Q9BRG1 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
VPS25Q9BRG1 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
VPS25Q9BRG1 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.55□□□□□ -0.24
VPS25Q9BRG1 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
VPS25Q9BRG1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VPS25Q9BRG1 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VPS25Q9BRG1 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
VPS25Q9BRG1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VPS25Q9BRG1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC13.55□□□□□ -0.24
VPS25Q9BRG1 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
VPS25Q9BRG1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
VPS25Q9BRG1 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
VPS25Q9BRG1 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.55□□□□□ -0.24
VPS25Q9BRG1 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
VPS25Q9BRG1 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms