Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.75■□□□□ 0.59
KRT78Q8N1N4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.75■□□□□ 0.59
KRT78Q8N1N4 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.75■□□□□ 0.59
KRT78Q8N1N4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.75■□□□□ 0.59
KRT78Q8N1N4 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.75■□□□□ 0.59
KRT78Q8N1N4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC18.75■□□□□ 0.59
KRT78Q8N1N4 AC004264.1-201ENST00000608354 794 ntBASIC18.75■□□□□ 0.59
KRT78Q8N1N4 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRT78Q8N1N4 NBPF21P-201ENST00000425093 1451 ntBASIC18.75■□□□□ 0.59
KRT78Q8N1N4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRT78Q8N1N4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRT78Q8N1N4 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
KRT78Q8N1N4 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRT78Q8N1N4 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRT78Q8N1N4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
KRT78Q8N1N4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
KRT78Q8N1N4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT78Q8N1N4 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.74■□□□□ 0.59
KRT78Q8N1N4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT78Q8N1N4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.74■□□□□ 0.59
KRT78Q8N1N4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT78Q8N1N4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT78Q8N1N4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.74■□□□□ 0.59
KRT78Q8N1N4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
KRT78Q8N1N4 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KRT78Q8N1N4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KRT78Q8N1N4 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.74■□□□□ 0.59
KRT78Q8N1N4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.74■□□□□ 0.59
KRT78Q8N1N4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KRT78Q8N1N4 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.74■□□□□ 0.59
KRT78Q8N1N4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.74■□□□□ 0.59
KRT78Q8N1N4 AC006058.3-201ENST00000606217 1069 ntBASIC18.74■□□□□ 0.59
KRT78Q8N1N4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KRT78Q8N1N4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
KRT78Q8N1N4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KRT78Q8N1N4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
KRT78Q8N1N4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.74■□□□□ 0.59
KRT78Q8N1N4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
KRT78Q8N1N4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
KRT78Q8N1N4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.74■□□□□ 0.59
KRT78Q8N1N4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
KRT78Q8N1N4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
KRT78Q8N1N4 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
KRT78Q8N1N4 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.73■□□□□ 0.59
KRT78Q8N1N4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
KRT78Q8N1N4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT78Q8N1N4 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT78Q8N1N4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT78Q8N1N4 POU5F1P3-201ENST00000428824 1078 ntBASIC18.73■□□□□ 0.59
KRT78Q8N1N4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.73■□□□□ 0.59
KRT78Q8N1N4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.73■□□□□ 0.59
KRT78Q8N1N4 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.73■□□□□ 0.59
KRT78Q8N1N4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.73■□□□□ 0.59
KRT78Q8N1N4 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.73■□□□□ 0.59
KRT78Q8N1N4 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.73■□□□□ 0.59
KRT78Q8N1N4 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.73■□□□□ 0.59
KRT78Q8N1N4 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.73■□□□□ 0.59
KRT78Q8N1N4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT78Q8N1N4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
KRT78Q8N1N4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT78Q8N1N4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
KRT78Q8N1N4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT78Q8N1N4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
KRT78Q8N1N4 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT78Q8N1N4 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
KRT78Q8N1N4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
KRT78Q8N1N4 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.72■□□□□ 0.59
KRT78Q8N1N4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.72■□□□□ 0.59
KRT78Q8N1N4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT78Q8N1N4 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.72■□□□□ 0.59
KRT78Q8N1N4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT78Q8N1N4 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
KRT78Q8N1N4 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
KRT78Q8N1N4 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KRT78Q8N1N4 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT78Q8N1N4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT78Q8N1N4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT78Q8N1N4 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT78Q8N1N4 AC239809.2-201ENST00000415381 517 ntBASIC18.72■□□□□ 0.59
KRT78Q8N1N4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
KRT78Q8N1N4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT78Q8N1N4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KRT78Q8N1N4 AC233263.1-201ENST00000578059 224 ntBASIC18.72■□□□□ 0.59
KRT78Q8N1N4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KRT78Q8N1N4 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT78Q8N1N4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
KRT78Q8N1N4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
KRT78Q8N1N4 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT78Q8N1N4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT78Q8N1N4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.72■□□□□ 0.59
KRT78Q8N1N4 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
KRT78Q8N1N4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.72■□□□□ 0.59
KRT78Q8N1N4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT78Q8N1N4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
KRT78Q8N1N4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
KRT78Q8N1N4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.72■□□□□ 0.59
KRT78Q8N1N4 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
KRT78Q8N1N4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
KRT78Q8N1N4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.71■□□□□ 0.59
KRT78Q8N1N4 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms