RNA–Protein interactions for RNA: ENST00000443677.6

RNF135-204, Transcript of ring finger protein 135, humanhuman

TSL 1 (best) BASIC

Gene RNF135, Length 1,261 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135-204ENST00000443677 NISCHQ9Y2I1 1504 aa47.87■■■■■ 5.25
RNF135-204ENST00000443677 CCDC180Q9P1Z9 1646 aa42.82■■■■■ 4.45
RNF135-204ENST00000443677 ABCC9O60706 1549 aa42.61■■■■■ 4.41
RNF135-204ENST00000443677 RB1CC1Q8TDY2 1594 aa40.68■■■■■ 4.1
RNF135-204ENST00000443677 NACADO15069 1562 aa40.47■■■■■ 4.07
RNF135-204ENST00000443677 DCAF8L2P0C7V8 631 aa40.42■■■■■ 4.06
RNF135-204ENST00000443677 MYO15BQ96JP2 1530 aa39.97■■■■□ 3.99
RNF135-204ENST00000443677 DNAJC5BQ9UF47 199 aa39.76■■■■□ 3.96
RNF135-204ENST00000443677 PABPN1Q86U42 306 aaKnown RBP eCLIP39.75■■■■□ 3.95
RNF135-204ENST00000443677 UNC13AQ9UPW8 1703 aa39.71■■■■□ 3.95
RNF135-204ENST00000443677 ZCCHC6Q5VYS8 1495 aaKnown RBP39.7■■■■□ 3.95
RNF135-204ENST00000443677 DCAF1Q9Y4B6 1507 aa39.55■■■■□ 3.92
RNF135-204ENST00000443677 BICRAQ9NZM4 1560 aa39.44■■■■□ 3.9
RNF135-204ENST00000443677 SCRIBQ14160 1630 aa39.03■■■■□ 3.84
RNF135-204ENST00000443677 SHROOM4Q9ULL8 1493 aa38.95■■■■□ 3.83
RNF135-204ENST00000443677 CC2D2AQ9P2K1 1620 aa38.49■■■■□ 3.75
RNF135-204ENST00000443677 EIF4G1Q04637 1599 aaKnown RBP38.47■■■■□ 3.75
RNF135-204ENST00000443677 CECR2Q9BXF3 1484 aa38.36■■■■□ 3.73
RNF135-204ENST00000443677 NCAPD3P42695 1498 aa37.36■■■■□ 3.57
RNF135-204ENST00000443677 SMARCA4P51532 1647 aa37.27■■■■□ 3.56
RNF135-204ENST00000443677 ATAD2BQ9ULI0 1458 aa37.26■■■■□ 3.56
RNF135-204ENST00000443677 SMARCA2P51531 1590 aa37.18■■■■□ 3.54
RNF135-204ENST00000443677 BAZ1AQ9NRL2 1556 aaPredicted RBP37.15■■■■□ 3.54
RNF135-204ENST00000443677 HMGXB3Q12766 1538 aa37.06■■■■□ 3.52
RNF135-204ENST00000443677 BAZ1BQ9UIG0 1483 aaKnown RBP36.93■■■■□ 3.5
RNF135-204ENST00000443677 PEG3Q9GZU2 1588 aa36.91■■■■□ 3.5
RNF135-204ENST00000443677 MROH2BQ7Z745 1585 aa36.87■■■■□ 3.49
RNF135-204ENST00000443677 ERCC6Q03468 1493 aa36.8■■■■□ 3.48
RNF135-204ENST00000443677 NESP48681 1621 aa36.66■■■■□ 3.46
RNF135-204ENST00000443677 CUX2O14529 1486 aa36.62■■■■□ 3.45
RNF135-204ENST00000443677 LAMC3Q9Y6N6 1575 aa36.46■■■■□ 3.43
RNF135-204ENST00000443677 WIZO95785 1651 aa36.45■■■■□ 3.43
RNF135-204ENST00000443677 DNAJC5Q9H3Z4 198 aa36.36■■■■□ 3.41
RNF135-204ENST00000443677 RSF1Q96T23 1441 aaPredicted RBP36.3■■■■□ 3.4
RNF135-204ENST00000443677 PDS5BQ9NTI5 1447 aa36.28■■■■□ 3.4
RNF135-204ENST00000443677 CADPSQ9ULU8 1353 aa36.25■■■■□ 3.39
RNF135-204ENST00000443677 THOC2Q8NI27 1593 aaKnown RBP36.2■■■■□ 3.39
RNF135-204ENST00000443677 KIF21AQ7Z4S6 1674 aa36.19■■■■□ 3.38
RNF135-204ENST00000443677 TOP2AP11388 1531 aaKnown RBP36■■■■□ 3.35
RNF135-204ENST00000443677 MRC2Q9UBG0 1479 aa35.91■■■■□ 3.34
RNF135-204ENST00000443677 CFTRP13569 1480 aa35.86■■■■□ 3.33
RNF135-204ENST00000443677 CEP164Q9UPV0 1460 aa35.82■■■■□ 3.32
RNF135-204ENST00000443677 FANCD2Q9BXW9 1451 aa35.81■■■■□ 3.32
RNF135-204ENST00000443677 WDR62O43379 1518 aa35.8■■■■□ 3.32
RNF135-204ENST00000443677 CCDC88BA6NC98 1476 aa35.62■■■■□ 3.29
RNF135-204ENST00000443677 SUPT5HO00267 1087 aaKnown RBP35.51■■■■□ 3.28
RNF135-204ENST00000443677 PRDM2Q13029 1718 aa35.5■■■■□ 3.27
RNF135-204ENST00000443677 URB2Q14146 1524 aaKnown RBP35.47■■■■□ 3.27
RNF135-204ENST00000443677 TOPBP1Q92547 1522 aa35.16■■■■□ 3.22
RNF135-204ENST00000443677 ABCC8Q09428 1581 aa35.15■■■■□ 3.22
RNF135-204ENST00000443677 IFT140Q96RY7 1462 aa35.11■■■■□ 3.21
RNF135-204ENST00000443677 OSCARQ8IYS5 282 aa35.08■■■■□ 3.21
RNF135-204ENST00000443677 DNMBPQ6XZF7 1577 aa35.04■■■■□ 3.2
RNF135-204ENST00000443677 ZNF608Q9ULD9 1512 aaPredicted RBP35.01■■■■□ 3.19
RNF135-204ENST00000443677 TRIM41Q8WV44 630 aa34.88■■■■□ 3.17
RNF135-204ENST00000443677 POLA1P09884 1462 aaPredicted RBP34.81■■■■□ 3.16
RNF135-204ENST00000443677 EIF4G3O43432 1585 aaKnown RBP34.81■■■■□ 3.16
RNF135-204ENST00000443677 TARBP1Q13395 1621 aaKnown RBP34.81■■■■□ 3.16
RNF135-204ENST00000443677 AQRO60306 1485 aaKnown RBP eCLIP34.75■■■■□ 3.15
RNF135-204ENST00000443677 SOGA1O94964 1423 aa34.71■■■■□ 3.15
RNF135-204ENST00000443677 RAD54L2Q9Y4B4 1467 aa34.69■■■■□ 3.14
RNF135-204ENST00000443677 CUX1P39880 1505 aa34.63■■■■□ 3.13
RNF135-204ENST00000443677 FGD5Q6ZNL6 1462 aa34.63■■■■□ 3.13
RNF135-204ENST00000443677 TDRD9Q8NDG6 1382 aaKnown RBP34.59■■■■□ 3.13
RNF135-204ENST00000443677 FBLN2P98095 1184 aa34.54■■■■□ 3.12
RNF135-204ENST00000443677 CHD1O14646 1710 aa34.51■■■■□ 3.12
RNF135-204ENST00000443677 RIMBP3CA6NJZ7 1639 aa34.49■■■■□ 3.11
RNF135-204ENST00000443677 RIMBP3BA6NNM3 1639 aa34.49■■■■□ 3.11
RNF135-204ENST00000443677 RIMBP3Q9UFD9 1639 aa34.49■■■■□ 3.11
RNF135-204ENST00000443677 WDR97A6NE52 1622 aa34.48■■■■□ 3.11
RNF135-204ENST00000443677 ARHGEF11O15085 1522 aa34.41■■■■□ 3.1
RNF135-204ENST00000443677 SNAPC4Q5SXM2 1469 aa34.37■■■■□ 3.09
RNF135-204ENST00000443677 GRIN2BQ13224 1484 aa34.34■■■■□ 3.09
RNF135-204ENST00000443677 CHMP7Q8WUX9 453 aaPredicted RBP34.33■■■■□ 3.09
RNF135-204ENST00000443677 MAGI1Q96QZ7 1491 aaPredicted RBP34.32■■■■□ 3.08
RNF135-204ENST00000443677 GAPVD1Q14C86 1478 aa34.27■■■■□ 3.08
RNF135-204ENST00000443677 ABCA10Q8WWZ4 1543 aa34.25■■■■□ 3.07
RNF135-204ENST00000443677 CYB5RLQ6IPT4 315 aa34.23■■■■□ 3.07
RNF135-204ENST00000443677 WRNQ14191 1432 aaPredicted RBP eCLIP34.21■■■■□ 3.07
RNF135-204ENST00000443677 SYNJ2O15056 1496 aa34.2■■■■□ 3.07
RNF135-204ENST00000443677 PBRM1Q86U86 1689 aa34.19■■■■□ 3.06
RNF135-204ENST00000443677 TOP2BQ02880 1626 aa34.15■■■■□ 3.06
RNF135-204ENST00000443677 ABCA5Q8WWZ7 1642 aa34.15■■■■□ 3.06
RNF135-204ENST00000443677 SYNJ1O43426 1573 aa34.15■■■■□ 3.06
RNF135-204ENST00000443677 BIVM-ERCC5R4GMW8 1640 aa34.14■■■■□ 3.06
RNF135-204ENST00000443677 CLASP1Q7Z460 1538 aa34.11■■■■□ 3.05
RNF135-204ENST00000443677 ARAP1Q96P48 1450 aa34.07■■■■□ 3.04
RNF135-204ENST00000443677 GRIN2AQ12879 1464 aa33.89■■■■□ 3.02
RNF135-204ENST00000443677 ADAMTS12P58397 1594 aa33.87■■■■□ 3.01
RNF135-204ENST00000443677 FHAD1B1AJZ9 1412 aa33.84■■■■□ 3.01
RNF135-204ENST00000443677 ERICH3Q5RHP9 1530 aa33.84■■■■□ 3.01
RNF135-204ENST00000443677 TRHP20396 242 aaPredicted RBP33.78■■■■□ 3
RNF135-204ENST00000443677 NUP160Q12769 1436 aa33.76■■■□□ 2.99
RNF135-204ENST00000443677 CEP170Q5SW79 1584 aa33.73■■■□□ 2.99
RNF135-204ENST00000443677 ERCC6L2Q5T890 1561 aa33.6■■■□□ 2.97
RNF135-204ENST00000443677 SHROOM2Q13796 1616 aa33.57■■■□□ 2.97
RNF135-204ENST00000443677 KIF27Q86VH2 1401 aa33.54■■■□□ 2.96
RNF135-204ENST00000443677 JPH4Q96JJ6 628 aa33.5■■■□□ 2.95
RNF135-204ENST00000443677 IGF1RP08069 1367 aa33.49■■■□□ 2.95
RNF135-204ENST00000443677 PRG4Q92954 1404 aaPredicted RBP33.45■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms