Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT78Q8N1N4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT78Q8N1N4 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
KRT78Q8N1N4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
KRT78Q8N1N4 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT78Q8N1N4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
KRT78Q8N1N4 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT78Q8N1N4 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT78Q8N1N4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.79■□□□□ 0.6
KRT78Q8N1N4 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT78Q8N1N4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
KRT78Q8N1N4 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT78Q8N1N4 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
KRT78Q8N1N4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
KRT78Q8N1N4 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
KRT78Q8N1N4 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.78■□□□□ 0.6
KRT78Q8N1N4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KRT78Q8N1N4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT78Q8N1N4 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
KRT78Q8N1N4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
KRT78Q8N1N4 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT78Q8N1N4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KRT78Q8N1N4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT78Q8N1N4 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KRT78Q8N1N4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT78Q8N1N4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT78Q8N1N4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT78Q8N1N4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KRT78Q8N1N4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.78■□□□□ 0.6
KRT78Q8N1N4 TUBB8P6-201ENST00000436895 1288 ntBASIC18.78■□□□□ 0.6
KRT78Q8N1N4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.78■□□□□ 0.6
KRT78Q8N1N4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.78■□□□□ 0.6
KRT78Q8N1N4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.78■□□□□ 0.6
KRT78Q8N1N4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.78■□□□□ 0.6
KRT78Q8N1N4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.78■□□□□ 0.6
KRT78Q8N1N4 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT78Q8N1N4 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT78Q8N1N4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KRT78Q8N1N4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT78Q8N1N4 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT78Q8N1N4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
KRT78Q8N1N4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
KRT78Q8N1N4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT78Q8N1N4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT78Q8N1N4 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.77■□□□□ 0.6
KRT78Q8N1N4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT78Q8N1N4 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT78Q8N1N4 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT78Q8N1N4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT78Q8N1N4 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
KRT78Q8N1N4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
KRT78Q8N1N4 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT78Q8N1N4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.77■□□□□ 0.6
KRT78Q8N1N4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT78Q8N1N4 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT78Q8N1N4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.77■□□□□ 0.6
KRT78Q8N1N4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.77■□□□□ 0.6
KRT78Q8N1N4 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
KRT78Q8N1N4 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
KRT78Q8N1N4 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
KRT78Q8N1N4 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
KRT78Q8N1N4 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
KRT78Q8N1N4 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.77■□□□□ 0.59
KRT78Q8N1N4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
KRT78Q8N1N4 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT78Q8N1N4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KRT78Q8N1N4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.76■□□□□ 0.59
KRT78Q8N1N4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT78Q8N1N4 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT78Q8N1N4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT78Q8N1N4 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.76■□□□□ 0.59
KRT78Q8N1N4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
KRT78Q8N1N4 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.76■□□□□ 0.59
KRT78Q8N1N4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KRT78Q8N1N4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT78Q8N1N4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
KRT78Q8N1N4 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KRT78Q8N1N4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT78Q8N1N4 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.76■□□□□ 0.59
KRT78Q8N1N4 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.76■□□□□ 0.59
KRT78Q8N1N4 KRT18P16-201ENST00000510337 1294 ntBASIC18.76■□□□□ 0.59
KRT78Q8N1N4 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.76■□□□□ 0.59
KRT78Q8N1N4 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.76■□□□□ 0.59
KRT78Q8N1N4 MTDHP1-201ENST00000605323 784 ntBASIC18.76■□□□□ 0.59
KRT78Q8N1N4 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT78Q8N1N4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT78Q8N1N4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
KRT78Q8N1N4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KRT78Q8N1N4 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT78Q8N1N4 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT78Q8N1N4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT78Q8N1N4 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
KRT78Q8N1N4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT78Q8N1N4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.76■□□□□ 0.59
KRT78Q8N1N4 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
KRT78Q8N1N4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.75■□□□□ 0.59
KRT78Q8N1N4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
KRT78Q8N1N4 KRT8P8-201ENST00000434750 1448 ntBASIC18.75■□□□□ 0.59
KRT78Q8N1N4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
KRT78Q8N1N4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms