Protein–RNA interactions for Protein: Q86YN6

PPARGC1B, Peroxisome proliferator-activated receptor gamma coactivator 1-beta, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1BQ86YN6 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
PPARGC1BQ86YN6 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
PPARGC1BQ86YN6 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC30.68■■■□□ 2.5
PPARGC1BQ86YN6 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
PPARGC1BQ86YN6 TK2-204ENST00000525974 1178 ntTSL 2 BASIC30.68■■■□□ 2.5
PPARGC1BQ86YN6 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC30.68■■■□□ 2.5
PPARGC1BQ86YN6 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
PPARGC1BQ86YN6 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
PPARGC1BQ86YN6 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
PPARGC1BQ86YN6 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
PPARGC1BQ86YN6 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC30.68■■■□□ 2.5
PPARGC1BQ86YN6 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
PPARGC1BQ86YN6 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC30.67■■■□□ 2.5
PPARGC1BQ86YN6 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
PPARGC1BQ86YN6 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
PPARGC1BQ86YN6 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC30.67■■■□□ 2.5
PPARGC1BQ86YN6 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
PPARGC1BQ86YN6 TREX1-205ENST00000625293 1783 ntBASIC30.67■■■□□ 2.5
PPARGC1BQ86YN6 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
PPARGC1BQ86YN6 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
PPARGC1BQ86YN6 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC30.67■■■□□ 2.5
PPARGC1BQ86YN6 F2R-202ENST00000505600 442 ntTSL 2 BASIC30.67■■■□□ 2.5
PPARGC1BQ86YN6 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC30.67■■■□□ 2.5
PPARGC1BQ86YN6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC30.67■■■□□ 2.5
PPARGC1BQ86YN6 MTDHP1-201ENST00000605323 784 ntBASIC30.67■■■□□ 2.5
PPARGC1BQ86YN6 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC30.67■■■□□ 2.5
PPARGC1BQ86YN6 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PPARGC1BQ86YN6 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PPARGC1BQ86YN6 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
PPARGC1BQ86YN6 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
PPARGC1BQ86YN6 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
PPARGC1BQ86YN6 BX323043.1-201ENST00000641006 1765 ntBASIC30.66■■■□□ 2.5
PPARGC1BQ86YN6 GOLGA2P11-201ENST00000562660 1621 ntBASIC30.66■■■□□ 2.5
PPARGC1BQ86YN6 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC30.66■■■□□ 2.5
PPARGC1BQ86YN6 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
PPARGC1BQ86YN6 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PPARGC1BQ86YN6 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PPARGC1BQ86YN6 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC30.66■■■□□ 2.5
PPARGC1BQ86YN6 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC30.66■■■□□ 2.5
PPARGC1BQ86YN6 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC30.66■■■□□ 2.5
PPARGC1BQ86YN6 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC30.66■■■□□ 2.5
PPARGC1BQ86YN6 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC30.66■■■□□ 2.5
PPARGC1BQ86YN6 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
PPARGC1BQ86YN6 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC30.66■■■□□ 2.5
PPARGC1BQ86YN6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC30.66■■■□□ 2.5
PPARGC1BQ86YN6 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
PPARGC1BQ86YN6 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
PPARGC1BQ86YN6 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
PPARGC1BQ86YN6 AC009237.14-201ENST00000609975 1594 ntBASIC30.66■■■□□ 2.5
PPARGC1BQ86YN6 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
PPARGC1BQ86YN6 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
PPARGC1BQ86YN6 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
PPARGC1BQ86YN6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC30.65■■■□□ 2.5
PPARGC1BQ86YN6 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
PPARGC1BQ86YN6 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
PPARGC1BQ86YN6 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
PPARGC1BQ86YN6 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC30.65■■■□□ 2.5
PPARGC1BQ86YN6 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
PPARGC1BQ86YN6 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
PPARGC1BQ86YN6 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC30.65■■■□□ 2.5
PPARGC1BQ86YN6 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
PPARGC1BQ86YN6 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC30.64■■■□□ 2.5
PPARGC1BQ86YN6 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
PPARGC1BQ86YN6 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
PPARGC1BQ86YN6 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
PPARGC1BQ86YN6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC30.64■■■□□ 2.5
PPARGC1BQ86YN6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC30.64■■■□□ 2.5
PPARGC1BQ86YN6 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
PPARGC1BQ86YN6 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.5
PPARGC1BQ86YN6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC30.64■■■□□ 2.5
PPARGC1BQ86YN6 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
PPARGC1BQ86YN6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC30.64■■■□□ 2.5
PPARGC1BQ86YN6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
PPARGC1BQ86YN6 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC30.64■■■□□ 2.5
PPARGC1BQ86YN6 KRT17P3-201ENST00000420566 1262 ntBASIC30.64■■■□□ 2.5
PPARGC1BQ86YN6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC30.64■■■□□ 2.5
PPARGC1BQ86YN6 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
PPARGC1BQ86YN6 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC30.64■■■□□ 2.5
PPARGC1BQ86YN6 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
PPARGC1BQ86YN6 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC30.64■■■□□ 2.5
PPARGC1BQ86YN6 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC30.64■■■□□ 2.49
PPARGC1BQ86YN6 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
PPARGC1BQ86YN6 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC30.63■■■□□ 2.49
PPARGC1BQ86YN6 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
PPARGC1BQ86YN6 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC30.63■■■□□ 2.49
PPARGC1BQ86YN6 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
PPARGC1BQ86YN6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
PPARGC1BQ86YN6 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
PPARGC1BQ86YN6 AC098590.1-201ENST00000468126 897 ntBASIC30.63■■■□□ 2.49
PPARGC1BQ86YN6 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
PPARGC1BQ86YN6 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
PPARGC1BQ86YN6 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
PPARGC1BQ86YN6 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC30.62■■■□□ 2.49
PPARGC1BQ86YN6 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC30.62■■■□□ 2.49
PPARGC1BQ86YN6 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
PPARGC1BQ86YN6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
PPARGC1BQ86YN6 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC30.62■■■□□ 2.49
PPARGC1BQ86YN6 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
PPARGC1BQ86YN6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC30.62■■■□□ 2.49
PPARGC1BQ86YN6 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC30.62■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms