Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SNAP47Q5SQN1 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNAP47Q5SQN1 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SNAP47Q5SQN1 AC079598.2-202ENST00000546624 1451 ntBASIC18.9■□□□□ 0.62
SNAP47Q5SQN1 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNAP47Q5SQN1 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNAP47Q5SQN1 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNAP47Q5SQN1 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNAP47Q5SQN1 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.9■□□□□ 0.62
SNAP47Q5SQN1 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.9■□□□□ 0.62
SNAP47Q5SQN1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNAP47Q5SQN1 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNAP47Q5SQN1 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNAP47Q5SQN1 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.9■□□□□ 0.62
SNAP47Q5SQN1 AL390955.1-201ENST00000428694 934 ntBASIC18.9■□□□□ 0.62
SNAP47Q5SQN1 TUBB8P6-201ENST00000436895 1288 ntBASIC18.9■□□□□ 0.62
SNAP47Q5SQN1 YBX1P10-201ENST00000444752 975 ntBASIC18.9■□□□□ 0.62
SNAP47Q5SQN1 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNAP47Q5SQN1 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.9■□□□□ 0.62
SNAP47Q5SQN1 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SNAP47Q5SQN1 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNAP47Q5SQN1 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNAP47Q5SQN1 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.9■□□□□ 0.62
SNAP47Q5SQN1 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SNAP47Q5SQN1 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.9■□□□□ 0.62
SNAP47Q5SQN1 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SNAP47Q5SQN1 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SNAP47Q5SQN1 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
SNAP47Q5SQN1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SNAP47Q5SQN1 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SNAP47Q5SQN1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
SNAP47Q5SQN1 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SNAP47Q5SQN1 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNAP47Q5SQN1 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNAP47Q5SQN1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNAP47Q5SQN1 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.89■□□□□ 0.61
SNAP47Q5SQN1 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.89■□□□□ 0.61
SNAP47Q5SQN1 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SNAP47Q5SQN1 C1QL1P1-201ENST00000568105 661 ntBASIC18.89■□□□□ 0.61
SNAP47Q5SQN1 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.89■□□□□ 0.61
SNAP47Q5SQN1 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.89■□□□□ 0.61
SNAP47Q5SQN1 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNAP47Q5SQN1 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.89■□□□□ 0.61
SNAP47Q5SQN1 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNAP47Q5SQN1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNAP47Q5SQN1 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SNAP47Q5SQN1 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SNAP47Q5SQN1 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SNAP47Q5SQN1 KRT8P9-201ENST00000558927 1449 ntBASIC18.89■□□□□ 0.61
SNAP47Q5SQN1 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SNAP47Q5SQN1 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SNAP47Q5SQN1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SNAP47Q5SQN1 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.89■□□□□ 0.61
SNAP47Q5SQN1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SNAP47Q5SQN1 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.88■□□□□ 0.61
SNAP47Q5SQN1 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.88■□□□□ 0.61
SNAP47Q5SQN1 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNAP47Q5SQN1 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNAP47Q5SQN1 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.88■□□□□ 0.61
SNAP47Q5SQN1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
SNAP47Q5SQN1 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNAP47Q5SQN1 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNAP47Q5SQN1 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.88■□□□□ 0.61
SNAP47Q5SQN1 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.88■□□□□ 0.61
SNAP47Q5SQN1 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.88■□□□□ 0.61
SNAP47Q5SQN1 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.88■□□□□ 0.61
SNAP47Q5SQN1 MIR6786-201ENST00000616843 113 ntBASIC18.88■□□□□ 0.61
SNAP47Q5SQN1 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.88■□□□□ 0.61
SNAP47Q5SQN1 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNAP47Q5SQN1 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SNAP47Q5SQN1 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNAP47Q5SQN1 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNAP47Q5SQN1 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNAP47Q5SQN1 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.88■□□□□ 0.61
SNAP47Q5SQN1 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.88■□□□□ 0.61
SNAP47Q5SQN1 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SNAP47Q5SQN1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SNAP47Q5SQN1 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SNAP47Q5SQN1 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SNAP47Q5SQN1 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNAP47Q5SQN1 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNAP47Q5SQN1 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
SNAP47Q5SQN1 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNAP47Q5SQN1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNAP47Q5SQN1 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.87■□□□□ 0.61
SNAP47Q5SQN1 LINC01521-201ENST00000504184 1943 ntBASIC18.87■□□□□ 0.61
SNAP47Q5SQN1 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNAP47Q5SQN1 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.87■□□□□ 0.61
SNAP47Q5SQN1 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SNAP47Q5SQN1 AL020996.1-203ENST00000536896 2307 ntBASIC18.87■□□□□ 0.61
SNAP47Q5SQN1 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.87■□□□□ 0.61
SNAP47Q5SQN1 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SNAP47Q5SQN1 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.87■□□□□ 0.61
SNAP47Q5SQN1 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.87■□□□□ 0.61
SNAP47Q5SQN1 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SNAP47Q5SQN1 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SNAP47Q5SQN1 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.87■□□□□ 0.61
SNAP47Q5SQN1 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SNAP47Q5SQN1 AC097493.4-201ENST00000641197 219 ntBASIC18.87■□□□□ 0.61
SNAP47Q5SQN1 AL031985.4-201ENST00000642138 673 ntBASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms