RNA–Protein interactions for RNA: ENST00000577543.5

TGIF1-222, Transcript of TGFB induced factor homeobox 1, humanhuman

TSL 3 BASIC

Gene TGIF1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGIF1-222ENST00000577543 NISCHQ9Y2I1 1504 aa47.29■■■■■ 5.16
TGIF1-222ENST00000577543 CCDC180Q9P1Z9 1646 aa42.31■■■■■ 4.36
TGIF1-222ENST00000577543 ABCC9O60706 1549 aa41.44■■■■■ 4.22
TGIF1-222ENST00000577543 RB1CC1Q8TDY2 1594 aa39.84■■■■□ 3.97
TGIF1-222ENST00000577543 NACADO15069 1562 aa39.71■■■■□ 3.95
TGIF1-222ENST00000577543 DCAF8L2P0C7V8 631 aa39.44■■■■□ 3.9
TGIF1-222ENST00000577543 ZCCHC6Q5VYS8 1495 aaKnown RBP39.4■■■■□ 3.9
TGIF1-222ENST00000577543 MYO15BQ96JP2 1530 aa39.37■■■■□ 3.89
TGIF1-222ENST00000577543 DCAF1Q9Y4B6 1507 aa39.14■■■■□ 3.86
TGIF1-222ENST00000577543 UNC13AQ9UPW8 1703 aa39.09■■■■□ 3.85
TGIF1-222ENST00000577543 BICRAQ9NZM4 1560 aa38.62■■■■□ 3.77
TGIF1-222ENST00000577543 PABPN1Q86U42 306 aaKnown RBP eCLIP38.56■■■■□ 3.76
TGIF1-222ENST00000577543 SCRIBQ14160 1630 aa38.54■■■■□ 3.76
TGIF1-222ENST00000577543 SHROOM4Q9ULL8 1493 aa38.22■■■■□ 3.71
TGIF1-222ENST00000577543 DNAJC5BQ9UF47 199 aa38.05■■■■□ 3.68
TGIF1-222ENST00000577543 EIF4G1Q04637 1599 aaKnown RBP37.63■■■■□ 3.62
TGIF1-222ENST00000577543 CC2D2AQ9P2K1 1620 aa37.54■■■■□ 3.6
TGIF1-222ENST00000577543 CECR2Q9BXF3 1484 aa37.25■■■■□ 3.55
TGIF1-222ENST00000577543 SMARCA4P51532 1647 aa36.84■■■■□ 3.49
TGIF1-222ENST00000577543 BAZ1AQ9NRL2 1556 aaPredicted RBP36.72■■■■□ 3.47
TGIF1-222ENST00000577543 SMARCA2P51531 1590 aa36.59■■■■□ 3.45
TGIF1-222ENST00000577543 ATAD2BQ9ULI0 1458 aa36.57■■■■□ 3.45
TGIF1-222ENST00000577543 NCAPD3P42695 1498 aa36.56■■■■□ 3.44
TGIF1-222ENST00000577543 HMGXB3Q12766 1538 aa36.49■■■■□ 3.43
TGIF1-222ENST00000577543 MROH2BQ7Z745 1585 aa36.44■■■■□ 3.42
TGIF1-222ENST00000577543 PEG3Q9GZU2 1588 aa36.44■■■■□ 3.42
TGIF1-222ENST00000577543 BAZ1BQ9UIG0 1483 aaKnown RBP36.31■■■■□ 3.4
TGIF1-222ENST00000577543 WIZO95785 1651 aa36.13■■■■□ 3.37
TGIF1-222ENST00000577543 RSF1Q96T23 1441 aaPredicted RBP35.9■■■■□ 3.34
TGIF1-222ENST00000577543 NESP48681 1621 aa35.79■■■■□ 3.32
TGIF1-222ENST00000577543 ERCC6Q03468 1493 aa35.76■■■■□ 3.32
TGIF1-222ENST00000577543 LAMC3Q9Y6N6 1575 aa35.74■■■■□ 3.31
TGIF1-222ENST00000577543 TOP2AP11388 1531 aaKnown RBP35.72■■■■□ 3.31
TGIF1-222ENST00000577543 KIF21AQ7Z4S6 1674 aa35.53■■■■□ 3.28
TGIF1-222ENST00000577543 CADPSQ9ULU8 1353 aa35.46■■■■□ 3.27
TGIF1-222ENST00000577543 CUX2O14529 1486 aa35.45■■■■□ 3.27
TGIF1-222ENST00000577543 THOC2Q8NI27 1593 aaKnown RBP35.42■■■■□ 3.26
TGIF1-222ENST00000577543 PDS5BQ9NTI5 1447 aa35.41■■■■□ 3.26
TGIF1-222ENST00000577543 PRDM2Q13029 1718 aa35.26■■■■□ 3.24
TGIF1-222ENST00000577543 CFTRP13569 1480 aa35.25■■■■□ 3.23
TGIF1-222ENST00000577543 CCDC88BA6NC98 1476 aa35.19■■■■□ 3.22
TGIF1-222ENST00000577543 CEP164Q9UPV0 1460 aa35.15■■■■□ 3.22
TGIF1-222ENST00000577543 FANCD2Q9BXW9 1451 aa35.13■■■■□ 3.21
TGIF1-222ENST00000577543 MRC2Q9UBG0 1479 aa35.12■■■■□ 3.21
TGIF1-222ENST00000577543 WDR62O43379 1518 aa35.06■■■■□ 3.2
TGIF1-222ENST00000577543 URB2Q14146 1524 aaKnown RBP34.8■■■■□ 3.16
TGIF1-222ENST00000577543 SUPT5HO00267 1087 aaKnown RBP34.76■■■■□ 3.16
TGIF1-222ENST00000577543 TOPBP1Q92547 1522 aa34.56■■■■□ 3.12
TGIF1-222ENST00000577543 DNMBPQ6XZF7 1577 aa34.55■■■■□ 3.12
TGIF1-222ENST00000577543 ABCC8Q09428 1581 aa34.51■■■■□ 3.12
TGIF1-222ENST00000577543 DNAJC5Q9H3Z4 198 aa34.44■■■■□ 3.1
TGIF1-222ENST00000577543 IFT140Q96RY7 1462 aa34.37■■■■□ 3.09
TGIF1-222ENST00000577543 TARBP1Q13395 1621 aaKnown RBP34.25■■■■□ 3.07
TGIF1-222ENST00000577543 POLA1P09884 1462 aaPredicted RBP34.25■■■■□ 3.07
TGIF1-222ENST00000577543 CUX1P39880 1505 aa34.24■■■■□ 3.07
TGIF1-222ENST00000577543 ZNF608Q9ULD9 1512 aaPredicted RBP34.24■■■■□ 3.07
TGIF1-222ENST00000577543 EIF4G3O43432 1585 aaKnown RBP34.23■■■■□ 3.07
TGIF1-222ENST00000577543 FGD5Q6ZNL6 1462 aa34.14■■■■□ 3.06
TGIF1-222ENST00000577543 RAD54L2Q9Y4B4 1467 aa34.07■■■■□ 3.04
TGIF1-222ENST00000577543 WDR97A6NE52 1622 aa34.02■■■■□ 3.04
TGIF1-222ENST00000577543 SOGA1O94964 1423 aa34.02■■■■□ 3.04
TGIF1-222ENST00000577543 AQRO60306 1485 aaKnown RBP eCLIP33.97■■■■□ 3.031e-7■■■■■ 26.9
TGIF1-222ENST00000577543 BIVM-ERCC5R4GMW8 1640 aa33.97■■■■□ 3.03
TGIF1-222ENST00000577543 TOP2BQ02880 1626 aa33.92■■■■□ 3.02
TGIF1-222ENST00000577543 SYNJ1O43426 1573 aa33.91■■■■□ 3.02
TGIF1-222ENST00000577543 WRNQ14191 1432 aaPredicted RBP eCLIP33.88■■■■□ 3.013e-13■■■■■ 117
TGIF1-222ENST00000577543 CHD1O14646 1710 aa33.88■■■■□ 3.01
TGIF1-222ENST00000577543 TDRD9Q8NDG6 1382 aaKnown RBP33.85■■■■□ 3.01
TGIF1-222ENST00000577543 PBRM1Q86U86 1689 aa33.83■■■■□ 3.01
TGIF1-222ENST00000577543 OSCARQ8IYS5 282 aa33.79■■■■□ 3
TGIF1-222ENST00000577543 ABCA10Q8WWZ4 1543 aa33.79■■■■□ 3
TGIF1-222ENST00000577543 ABCA5Q8WWZ7 1642 aa33.78■■■■□ 3
TGIF1-222ENST00000577543 SNAPC4Q5SXM2 1469 aa33.74■■■□□ 2.99
TGIF1-222ENST00000577543 GRIN2BQ13224 1484 aa33.71■■■□□ 2.99
TGIF1-222ENST00000577543 GAPVD1Q14C86 1478 aa33.69■■■□□ 2.98
TGIF1-222ENST00000577543 MAGI1Q96QZ7 1491 aaPredicted RBP33.68■■■□□ 2.98
TGIF1-222ENST00000577543 FBLN2P98095 1184 aa33.56■■■□□ 2.96
TGIF1-222ENST00000577543 SYNJ2O15056 1496 aa33.53■■■□□ 2.96
TGIF1-222ENST00000577543 RIMBP3CA6NJZ7 1639 aa33.5■■■□□ 2.95
TGIF1-222ENST00000577543 RIMBP3BA6NNM3 1639 aa33.5■■■□□ 2.95
TGIF1-222ENST00000577543 RIMBP3Q9UFD9 1639 aa33.5■■■□□ 2.95
TGIF1-222ENST00000577543 ADAMTS12P58397 1594 aa33.47■■■□□ 2.95
TGIF1-222ENST00000577543 CHMP7Q8WUX9 453 aaPredicted RBP33.42■■■□□ 2.94
TGIF1-222ENST00000577543 ARHGEF11O15085 1522 aa33.42■■■□□ 2.94
TGIF1-222ENST00000577543 ERICH3Q5RHP9 1530 aa33.41■■■□□ 2.94
TGIF1-222ENST00000577543 CLASP1Q7Z460 1538 aa33.4■■■□□ 2.94
TGIF1-222ENST00000577543 GRIN2AQ12879 1464 aa33.31■■■□□ 2.92
TGIF1-222ENST00000577543 TRIM41Q8WV44 630 aa33.29■■■□□ 2.92
TGIF1-222ENST00000577543 FHAD1B1AJZ9 1412 aa33.27■■■□□ 2.92
TGIF1-222ENST00000577543 CEP170Q5SW79 1584 aa33.2■■■□□ 2.91
TGIF1-222ENST00000577543 KIF27Q86VH2 1401 aa33.19■■■□□ 2.9
TGIF1-222ENST00000577543 CUL7Q14999 1698 aa33.16■■■□□ 2.9
TGIF1-222ENST00000577543 NUP160Q12769 1436 aa33.13■■■□□ 2.89
TGIF1-222ENST00000577543 ARAP1Q96P48 1450 aa33.12■■■□□ 2.89
TGIF1-222ENST00000577543 SHROOM2Q13796 1616 aa33.02■■■□□ 2.88
TGIF1-222ENST00000577543 RUSC2Q8N2Y8 1516 aa33■■■□□ 2.87
TGIF1-222ENST00000577543 IGF1RP08069 1367 aa32.98■■■□□ 2.87
TGIF1-222ENST00000577543 CYB5RLQ6IPT4 315 aa32.96■■■□□ 2.87
TGIF1-222ENST00000577543 ERCC6L2Q5T890 1561 aa32.9■■■□□ 2.86
TGIF1-222ENST00000577543 CARMIL1Q5VZK9 1371 aa32.83■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms