Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
UBQLN2Q9UHD9 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
UBQLN2Q9UHD9 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
UBQLN2Q9UHD9 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC21.47■■□□□ 1.03
UBQLN2Q9UHD9 AL139393.2-201ENST00000608721 2025 ntBASIC21.46■■□□□ 1.03
UBQLN2Q9UHD9 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBQLN2Q9UHD9 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC21.46■■□□□ 1.03
UBQLN2Q9UHD9 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
UBQLN2Q9UHD9 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBQLN2Q9UHD9 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.45■■□□□ 1.02
UBQLN2Q9UHD9 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
UBQLN2Q9UHD9 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UBQLN2Q9UHD9 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UBQLN2Q9UHD9 DYNLL1-208ENST00000550178 581 ntBASIC21.44■■□□□ 1.02
UBQLN2Q9UHD9 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
UBQLN2Q9UHD9 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBQLN2Q9UHD9 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBQLN2Q9UHD9 AC020928.2-201ENST00000588717 2197 ntBASIC21.43■■□□□ 1.02
UBQLN2Q9UHD9 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UBQLN2Q9UHD9 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
UBQLN2Q9UHD9 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC21.42■■□□□ 1.02
UBQLN2Q9UHD9 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
UBQLN2Q9UHD9 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
UBQLN2Q9UHD9 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UBQLN2Q9UHD9 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UBQLN2Q9UHD9 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
UBQLN2Q9UHD9 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
UBQLN2Q9UHD9 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
UBQLN2Q9UHD9 AL135925.1-201ENST00000605920 1701 ntBASIC21.41■■□□□ 1.02
UBQLN2Q9UHD9 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC21.41■■□□□ 1.02
UBQLN2Q9UHD9 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
UBQLN2Q9UHD9 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
UBQLN2Q9UHD9 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
UBQLN2Q9UHD9 BX255925.1-201ENST00000566954 1854 ntBASIC21.41■■□□□ 1.02
UBQLN2Q9UHD9 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.4■■□□□ 1.02
UBQLN2Q9UHD9 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
UBQLN2Q9UHD9 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
UBQLN2Q9UHD9 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC21.39■■□□□ 1.02
UBQLN2Q9UHD9 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
UBQLN2Q9UHD9 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
UBQLN2Q9UHD9 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
UBQLN2Q9UHD9 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
UBQLN2Q9UHD9 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBQLN2Q9UHD9 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBQLN2Q9UHD9 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
UBQLN2Q9UHD9 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBQLN2Q9UHD9 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
UBQLN2Q9UHD9 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
UBQLN2Q9UHD9 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
UBQLN2Q9UHD9 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBQLN2Q9UHD9 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBQLN2Q9UHD9 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
UBQLN2Q9UHD9 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
UBQLN2Q9UHD9 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.36■■□□□ 1.01
UBQLN2Q9UHD9 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBQLN2Q9UHD9 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBQLN2Q9UHD9 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBQLN2Q9UHD9 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
UBQLN2Q9UHD9 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
UBQLN2Q9UHD9 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
UBQLN2Q9UHD9 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
UBQLN2Q9UHD9 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
UBQLN2Q9UHD9 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
UBQLN2Q9UHD9 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
UBQLN2Q9UHD9 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC21.34■■□□□ 1.01
UBQLN2Q9UHD9 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC21.34■■□□□ 1.01
UBQLN2Q9UHD9 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
UBQLN2Q9UHD9 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.34■■□□□ 1.01
UBQLN2Q9UHD9 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
UBQLN2Q9UHD9 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.33■■□□□ 1.01
UBQLN2Q9UHD9 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
UBQLN2Q9UHD9 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.33■■□□□ 1.01
UBQLN2Q9UHD9 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
UBQLN2Q9UHD9 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1
UBQLN2Q9UHD9 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
UBQLN2Q9UHD9 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.32■■□□□ 1
UBQLN2Q9UHD9 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.32■■□□□ 1
UBQLN2Q9UHD9 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
UBQLN2Q9UHD9 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.32■■□□□ 1
UBQLN2Q9UHD9 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
UBQLN2Q9UHD9 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
UBQLN2Q9UHD9 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
UBQLN2Q9UHD9 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.31■■□□□ 1
UBQLN2Q9UHD9 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
UBQLN2Q9UHD9 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.31■■□□□ 1
UBQLN2Q9UHD9 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.31■■□□□ 1
UBQLN2Q9UHD9 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
UBQLN2Q9UHD9 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UBQLN2Q9UHD9 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
UBQLN2Q9UHD9 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
UBQLN2Q9UHD9 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
UBQLN2Q9UHD9 AC091060.1-201ENST00000623524 1766 ntBASIC21.3■■□□□ 1
UBQLN2Q9UHD9 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.3■■□□□ 1
UBQLN2Q9UHD9 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
UBQLN2Q9UHD9 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.28■■□□□ 1
UBQLN2Q9UHD9 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC21.28■■□□□ 1
UBQLN2Q9UHD9 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
UBQLN2Q9UHD9 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.28■■□□□ 1
UBQLN2Q9UHD9 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
UBQLN2Q9UHD9 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 801.1 ms