Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CHD6Q8TD26 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHD6Q8TD26 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC24.21■■□□□ 1.47
CHD6Q8TD26 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
CHD6Q8TD26 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
CHD6Q8TD26 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC24.2■■□□□ 1.47
CHD6Q8TD26 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CHD6Q8TD26 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CHD6Q8TD26 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
CHD6Q8TD26 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC24.2■■□□□ 1.46
CHD6Q8TD26 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CHD6Q8TD26 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC24.19■■□□□ 1.46
CHD6Q8TD26 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
CHD6Q8TD26 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CHD6Q8TD26 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
CHD6Q8TD26 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.18■■□□□ 1.46
CHD6Q8TD26 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CHD6Q8TD26 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC24.17■■□□□ 1.46
CHD6Q8TD26 SPCS2P3-201ENST00000500401 656 ntBASIC24.17■■□□□ 1.46
CHD6Q8TD26 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC24.17■■□□□ 1.46
CHD6Q8TD26 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC24.17■■□□□ 1.46
CHD6Q8TD26 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24.17■■□□□ 1.46
CHD6Q8TD26 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
CHD6Q8TD26 KRT8P33-201ENST00000508125 1423 ntBASIC24.16■■□□□ 1.46
CHD6Q8TD26 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
CHD6Q8TD26 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC24.15■■□□□ 1.46
CHD6Q8TD26 DUX4L18-201ENST00000553347 1267 ntBASIC24.15■■□□□ 1.46
CHD6Q8TD26 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CHD6Q8TD26 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
CHD6Q8TD26 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC24.15■■□□□ 1.46
CHD6Q8TD26 RP9P-202ENST00000450133 1212 ntBASIC24.14■■□□□ 1.46
CHD6Q8TD26 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC24.14■■□□□ 1.46
CHD6Q8TD26 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC24.14■■□□□ 1.45
CHD6Q8TD26 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
CHD6Q8TD26 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC24.13■■□□□ 1.45
CHD6Q8TD26 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CHD6Q8TD26 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CHD6Q8TD26 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CHD6Q8TD26 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC24.12■■□□□ 1.45
CHD6Q8TD26 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CHD6Q8TD26 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CHD6Q8TD26 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC24.09■■□□□ 1.45
CHD6Q8TD26 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CHD6Q8TD26 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CHD6Q8TD26 PEMT-206ENST00000435340 960 ntTSL 5 BASIC24.08■■□□□ 1.45
CHD6Q8TD26 RALB-208ENST00000631312 311 ntTSL 5 BASIC24.08■■□□□ 1.45
CHD6Q8TD26 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.08■■□□□ 1.45
CHD6Q8TD26 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
CHD6Q8TD26 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
CHD6Q8TD26 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CHD6Q8TD26 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CHD6Q8TD26 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
CHD6Q8TD26 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
CHD6Q8TD26 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
CHD6Q8TD26 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
CHD6Q8TD26 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CHD6Q8TD26 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CHD6Q8TD26 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
CHD6Q8TD26 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CHD6Q8TD26 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC24.05■■□□□ 1.44
CHD6Q8TD26 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC24.04■■□□□ 1.44
CHD6Q8TD26 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.04■■□□□ 1.44
CHD6Q8TD26 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CHD6Q8TD26 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC24.03■■□□□ 1.44
CHD6Q8TD26 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
CHD6Q8TD26 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC24.02■■□□□ 1.44
CHD6Q8TD26 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
CHD6Q8TD26 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHD6Q8TD26 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CHD6Q8TD26 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.98■■□□□ 1.43
CHD6Q8TD26 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
CHD6Q8TD26 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
CHD6Q8TD26 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC23.97■■□□□ 1.43
CHD6Q8TD26 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CHD6Q8TD26 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CHD6Q8TD26 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
CHD6Q8TD26 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
CHD6Q8TD26 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
CHD6Q8TD26 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
CHD6Q8TD26 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
CHD6Q8TD26 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.94■■□□□ 1.42
CHD6Q8TD26 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
CHD6Q8TD26 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
CHD6Q8TD26 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.92■■□□□ 1.42
CHD6Q8TD26 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.92■■□□□ 1.42
CHD6Q8TD26 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.92■■□□□ 1.42
CHD6Q8TD26 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.92■■□□□ 1.42
CHD6Q8TD26 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.92■■□□□ 1.42
CHD6Q8TD26 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC23.91■■□□□ 1.42
CHD6Q8TD26 AC010980.1-201ENST00000587192 1142 ntBASIC23.91■■□□□ 1.42
CHD6Q8TD26 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHD6Q8TD26 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHD6Q8TD26 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHD6Q8TD26 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.91■■□□□ 1.42
CHD6Q8TD26 CHST11-203ENST00000547956 936 ntTSL 2 BASIC23.91■■□□□ 1.42
CHD6Q8TD26 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
CHD6Q8TD26 DUX4L9-201ENST00000449051 1259 ntBASIC23.9■■□□□ 1.42
CHD6Q8TD26 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.9■■□□□ 1.42
CHD6Q8TD26 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
CHD6Q8TD26 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC23.9■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 155.9 ms