Protein–RNA interactions for Protein: Q8N145

LGI3, Leucine-rich repeat LGI family member 3, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI3Q8N145 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
LGI3Q8N145 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LGI3Q8N145 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LGI3Q8N145 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
LGI3Q8N145 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
LGI3Q8N145 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LGI3Q8N145 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.07■□□□□ 0.96
LGI3Q8N145 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LGI3Q8N145 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.07■□□□□ 0.96
LGI3Q8N145 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
LGI3Q8N145 AP002365.1-201ENST00000603448 772 ntBASIC21.07■□□□□ 0.96
LGI3Q8N145 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LGI3Q8N145 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LGI3Q8N145 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
LGI3Q8N145 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
LGI3Q8N145 AL133380.1-201ENST00000506013 324 ntBASIC21.06■□□□□ 0.96
LGI3Q8N145 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LGI3Q8N145 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LGI3Q8N145 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
LGI3Q8N145 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LGI3Q8N145 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
LGI3Q8N145 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LGI3Q8N145 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LGI3Q8N145 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LGI3Q8N145 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LGI3Q8N145 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LGI3Q8N145 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LGI3Q8N145 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
LGI3Q8N145 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
LGI3Q8N145 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.02■□□□□ 0.96
LGI3Q8N145 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.02■□□□□ 0.96
LGI3Q8N145 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LGI3Q8N145 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.02■□□□□ 0.95
LGI3Q8N145 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LGI3Q8N145 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LGI3Q8N145 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LGI3Q8N145 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
LGI3Q8N145 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.01■□□□□ 0.95
LGI3Q8N145 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
LGI3Q8N145 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21■□□□□ 0.95
LGI3Q8N145 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21■□□□□ 0.95
LGI3Q8N145 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC21■□□□□ 0.95
LGI3Q8N145 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC21■□□□□ 0.95
LGI3Q8N145 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC21■□□□□ 0.95
LGI3Q8N145 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LGI3Q8N145 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LGI3Q8N145 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LGI3Q8N145 KLF16-203ENST00000592313 508 ntTSL 3 BASIC20.99■□□□□ 0.95
LGI3Q8N145 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LGI3Q8N145 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LGI3Q8N145 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LGI3Q8N145 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LGI3Q8N145 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.98■□□□□ 0.95
LGI3Q8N145 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
LGI3Q8N145 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
LGI3Q8N145 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
LGI3Q8N145 AL449106.1-201ENST00000608517 1980 ntBASIC20.97■□□□□ 0.95
LGI3Q8N145 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LGI3Q8N145 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.97■□□□□ 0.95
LGI3Q8N145 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.96■□□□□ 0.95
LGI3Q8N145 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LGI3Q8N145 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LGI3Q8N145 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.96■□□□□ 0.95
LGI3Q8N145 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
LGI3Q8N145 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LGI3Q8N145 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
LGI3Q8N145 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
LGI3Q8N145 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
LGI3Q8N145 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LGI3Q8N145 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LGI3Q8N145 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LGI3Q8N145 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
LGI3Q8N145 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
LGI3Q8N145 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
LGI3Q8N145 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
LGI3Q8N145 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
LGI3Q8N145 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
LGI3Q8N145 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.93■□□□□ 0.94
LGI3Q8N145 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LGI3Q8N145 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
LGI3Q8N145 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LGI3Q8N145 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC20.91■□□□□ 0.94
LGI3Q8N145 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LGI3Q8N145 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.9■□□□□ 0.94
LGI3Q8N145 AC127502.1-201ENST00000399971 1502 ntBASIC20.9■□□□□ 0.94
LGI3Q8N145 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LGI3Q8N145 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.9■□□□□ 0.94
LGI3Q8N145 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
LGI3Q8N145 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LGI3Q8N145 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.9■□□□□ 0.94
LGI3Q8N145 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
LGI3Q8N145 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LGI3Q8N145 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LGI3Q8N145 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
LGI3Q8N145 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LGI3Q8N145 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LGI3Q8N145 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
LGI3Q8N145 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.88■□□□□ 0.93
LGI3Q8N145 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
LGI3Q8N145 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 10.8 ms