Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.87■■□□□ 1.41
RTL4Q6ZR62 DUX4L11-201ENST00000611504 1267 ntBASIC23.87■■□□□ 1.41
RTL4Q6ZR62 DUX4L12-201ENST00000614593 1267 ntBASIC23.87■■□□□ 1.41
RTL4Q6ZR62 DUX4L14-201ENST00000621227 1267 ntBASIC23.87■■□□□ 1.41
RTL4Q6ZR62 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RTL4Q6ZR62 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.86■■□□□ 1.41
RTL4Q6ZR62 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
RTL4Q6ZR62 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
RTL4Q6ZR62 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC23.86■■□□□ 1.41
RTL4Q6ZR62 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RTL4Q6ZR62 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC23.85■■□□□ 1.41
RTL4Q6ZR62 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.85■■□□□ 1.41
RTL4Q6ZR62 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
RTL4Q6ZR62 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RTL4Q6ZR62 AC127502.1-201ENST00000399971 1502 ntBASIC23.84■■□□□ 1.41
RTL4Q6ZR62 LINC00273-201ENST00000539813 1452 ntBASIC23.84■■□□□ 1.41
RTL4Q6ZR62 HLA-V-202ENST00000446817 847 ntBASIC23.84■■□□□ 1.41
RTL4Q6ZR62 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC23.84■■□□□ 1.41
RTL4Q6ZR62 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RTL4Q6ZR62 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.83■■□□□ 1.41
RTL4Q6ZR62 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.83■■□□□ 1.41
RTL4Q6ZR62 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC23.83■■□□□ 1.41
RTL4Q6ZR62 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
RTL4Q6ZR62 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.82■■□□□ 1.4
RTL4Q6ZR62 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.82■■□□□ 1.4
RTL4Q6ZR62 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RTL4Q6ZR62 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
RTL4Q6ZR62 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.82■■□□□ 1.4
RTL4Q6ZR62 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.82■■□□□ 1.4
RTL4Q6ZR62 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.82■■□□□ 1.4
RTL4Q6ZR62 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC23.82■■□□□ 1.4
RTL4Q6ZR62 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.81■■□□□ 1.4
RTL4Q6ZR62 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RTL4Q6ZR62 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RTL4Q6ZR62 MBP-237ENST00000579129 1052 ntTSL 5 BASIC23.81■■□□□ 1.4
RTL4Q6ZR62 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC23.81■■□□□ 1.4
RTL4Q6ZR62 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC23.81■■□□□ 1.4
RTL4Q6ZR62 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC23.8■■□□□ 1.4
RTL4Q6ZR62 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTL4Q6ZR62 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RTL4Q6ZR62 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RTL4Q6ZR62 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RTL4Q6ZR62 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.78■■□□□ 1.4
RTL4Q6ZR62 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RTL4Q6ZR62 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC23.77■■□□□ 1.4
RTL4Q6ZR62 MIR3648-2-201ENST00000581792 180 ntBASIC23.77■■□□□ 1.4
RTL4Q6ZR62 MIR3648-1-201ENST00000615959 180 ntBASIC23.77■■□□□ 1.4
RTL4Q6ZR62 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.77■■□□□ 1.4
RTL4Q6ZR62 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RTL4Q6ZR62 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RTL4Q6ZR62 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RTL4Q6ZR62 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
RTL4Q6ZR62 DUX4L13-201ENST00000554103 1267 ntBASIC23.75■■□□□ 1.39
RTL4Q6ZR62 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.75■■□□□ 1.39
RTL4Q6ZR62 DUX4L15-201ENST00000611059 1267 ntBASIC23.75■■□□□ 1.39
RTL4Q6ZR62 DUX4L23-201ENST00000615195 1269 ntBASIC23.75■■□□□ 1.39
RTL4Q6ZR62 DUX4L24-201ENST00000617576 1269 ntBASIC23.75■■□□□ 1.39
RTL4Q6ZR62 DUX4L22-201ENST00000618238 1269 ntBASIC23.75■■□□□ 1.39
RTL4Q6ZR62 DUX4L20-201ENST00000619712 1269 ntBASIC23.75■■□□□ 1.39
RTL4Q6ZR62 DUX4L21-201ENST00000622058 1269 ntBASIC23.75■■□□□ 1.39
RTL4Q6ZR62 DUX4L10-201ENST00000622460 1267 ntBASIC23.75■■□□□ 1.39
RTL4Q6ZR62 DUX4L25-201ENST00000624915 1269 ntBASIC23.75■■□□□ 1.39
RTL4Q6ZR62 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.75■■□□□ 1.39
RTL4Q6ZR62 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RTL4Q6ZR62 CR559946.2-201ENST00000623684 991 ntBASIC23.74■■□□□ 1.39
RTL4Q6ZR62 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RTL4Q6ZR62 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RTL4Q6ZR62 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
RTL4Q6ZR62 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RTL4Q6ZR62 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RTL4Q6ZR62 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
RTL4Q6ZR62 AC016575.1-201ENST00000607026 382 ntBASIC23.73■■□□□ 1.39
RTL4Q6ZR62 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RTL4Q6ZR62 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTL4Q6ZR62 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTL4Q6ZR62 CHML-204ENST00000638121 920 ntTSL 2 BASIC23.72■■□□□ 1.39
RTL4Q6ZR62 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RTL4Q6ZR62 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
RTL4Q6ZR62 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTL4Q6ZR62 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
RTL4Q6ZR62 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RTL4Q6ZR62 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RTL4Q6ZR62 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RTL4Q6ZR62 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RTL4Q6ZR62 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RTL4Q6ZR62 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RTL4Q6ZR62 AL139393.2-201ENST00000608721 2025 ntBASIC23.69■■□□□ 1.38
RTL4Q6ZR62 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RTL4Q6ZR62 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC23.69■■□□□ 1.38
RTL4Q6ZR62 MIR639-201ENST00000384974 98 ntBASIC23.69■■□□□ 1.38
RTL4Q6ZR62 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC23.69■■□□□ 1.38
RTL4Q6ZR62 RPS2-202ENST00000526522 924 ntTSL 2 BASIC23.69■■□□□ 1.38
RTL4Q6ZR62 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RTL4Q6ZR62 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
RTL4Q6ZR62 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RTL4Q6ZR62 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RTL4Q6ZR62 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.68■■□□□ 1.38
RTL4Q6ZR62 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RTL4Q6ZR62 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
RTL4Q6ZR62 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms