Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 TMEM161B-212ENST00000513487 546 ntTSL 49.09□□□□□ -0.957e-9■■■■■ 38.6
LSM11P83369 PAXIP1-206ENST00000473219 5515 ntTSL 58.39□□□□□ -1.077e-9■■■■■ 38.6
LSM11P83369 TMEM161B-205ENST00000506536 2328 ntTSL 5 BASIC8.37□□□□□ -1.077e-9■■■■■ 38.6
LSM11P83369 EMSY-211ENST00000531641 1439 ntTSL 28.16□□□□□ -1.17e-9■■■■■ 38.6
LSM11P83369 PAXIP1-205ENST00000464717 3792 ntTSL 58.15□□□□□ -1.17e-9■■■■■ 38.6
LSM11P83369 TMEM161B-209ENST00000511087 2804 ntTSL 1 (best)7.96□□□□□ -1.137e-9■■■■■ 38.6
LSM11P83369 EMSY-203ENST00000524451 653 ntTSL 37.45□□□□□ -1.227e-9■■■■■ 38.6
LSM11P83369 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC7.04□□□□□ -1.288e-17■■■■■ 38.6
LSM11P83369 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.368e-17■■■■■ 38.6
LSM11P83369 TMEM161B-208ENST00000510089 7608 ntTSL 1 (best)2.99□□□□□ -1.937e-9■■■■■ 38.6
LSM11P83369 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.531e-6■■■■■ 38.2
LSM11P83369 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.621e-6■■■■■ 38.2
LSM11P83369 SLC19A1-204ENST00000427839 648 ntTSL 315.54■□□□□ 0.081e-10■■■■■ 38
LSM11P83369 SLC19A1-205ENST00000443742 777 ntTSL 313.83□□□□□ -0.21e-10■■■■■ 38
LSM11P83369 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC11.74□□□□□ -0.531e-10■■■■■ 38
LSM11P83369 DUXAP9-205ENST00000619938 642 ntTSL 1 (best)9.73□□□□□ -0.851e-10■■■■■ 38
LSM11P83369 DUXAP9-203ENST00000610585 903 ntTSL 39.46□□□□□ -0.91e-10■■■■■ 38
LSM11P83369 DUXAP9-207ENST00000621361 2397 ntTSL 1 (best)8.38□□□□□ -1.071e-10■■■■■ 38
LSM11P83369 COPG2-202ENST00000425248 3134 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.795e-11■■■■■ 37.9
LSM11P83369 COPG2-203ENST00000617523 2142 ntTSL 57.31□□□□□ -1.245e-11■■■■■ 37.9
LSM11P83369 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.421e-10■■■■■ 37.9
LSM11P83369 TBCD-216ENST00000574886 883 ntTSL 512.58□□□□□ -0.45e-10■■■■■ 37.7
LSM11P83369 TBCD-215ENST00000574818 771 ntTSL 310.1□□□□□ -0.795e-10■■■■■ 37.7
LSM11P83369 TBCD-205ENST00000571618 775 ntTSL 39.58□□□□□ -0.885e-10■■■■■ 37.7
LSM11P83369 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18.73■□□□□ 0.592e-16■■■■■ 37.6
LSM11P83369 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.52e-16■■■■■ 37.6
LSM11P83369 EMD-203ENST00000428228 946 ntTSL 316.13■□□□□ 0.172e-16■■■■■ 37.6
LSM11P83369 EMD-208ENST00000492448 832 ntTSL 216.01■□□□□ 0.152e-16■■■■■ 37.6
LSM11P83369 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.38■□□□□ 0.052e-16■■■■■ 37.6
LSM11P83369 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.052e-16■■■■■ 37.6
LSM11P83369 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.092e-16■■■■■ 37.6
LSM11P83369 MIB1-204ENST00000578646 3306 ntTSL 210.43□□□□□ -0.742e-16■■■■■ 37.6
LSM11P83369 BAZ1A-205ENST00000553573 445 ntTSL 38.94□□□□□ -0.982e-16■■■■■ 37.6
LSM11P83369 BAZ1A-206ENST00000553853 433 ntTSL 37.91□□□□□ -1.142e-16■■■■■ 37.6
LSM11P83369 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.83□□□□□ -0.21e-9■■■■■ 37.2
LSM11P83369 TBCD-224ENST00000576760 1059 ntTSL 510.49□□□□□ -0.732e-7■■■■■ 37
LSM11P83369 SNHG17-207ENST00000449469 2138 ntTSL 215.8■□□□□ 0.123e-10■■■■■ 36.9
LSM11P83369 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.97□□□□□ -0.013e-10■■■■■ 36.9
LSM11P83369 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.15□□□□□ -0.143e-10■■■■■ 36.9
LSM11P83369 SNHG17-202ENST00000414142 2102 ntTSL 212.73□□□□□ -0.373e-10■■■■■ 36.9
LSM11P83369 SNHG17-204ENST00000423536 517 ntTSL 2 BASIC7.42□□□□□ -1.223e-10■■■■■ 36.9
LSM11P83369 SRSF11-209ENST00000463877 617 ntTSL 224.71■■□□□ 1.552e-8■■■■■ 36.6
LSM11P83369 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.23■■□□□ 1.156e-16■■■■■ 36.6
LSM11P83369 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.842e-8■■■■■ 36.6
LSM11P83369 STXBP2-208ENST00000595800 1974 ntTSL 219.11■□□□□ 0.652e-8■■■■■ 36.6
LSM11P83369 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.93■□□□□ 0.466e-16■■■■■ 36.6
LSM11P83369 STXBP2-220ENST00000601061 706 ntTSL 317.79■□□□□ 0.442e-8■■■■■ 36.6
LSM11P83369 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.236e-16■■■■■ 36.6
LSM11P83369 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.112e-8■■■■■ 36.6
LSM11P83369 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC12.88□□□□□ -0.352e-8■■■■■ 36.6
LSM11P83369 AC008014.1-203ENST00000611243 1569 ntTSL 1 (best) BASIC11.02□□□□□ -0.652e-8■■■■■ 36.6
LSM11P83369 REL-201ENST00000295025 11255 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.852e-8■■■■■ 36.6
LSM11P83369 FBXL20-201ENST00000264658 10388 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.066e-16■■■■■ 36.6
LSM11P83369 ATP2B4-202ENST00000356729 613 ntTSL 58.39□□□□□ -1.072e-8■■■■■ 36.6
LSM11P83369 ATP2B4-205ENST00000458092 429 ntTSL 38.22□□□□□ -1.092e-8■■■■■ 36.6
LSM11P83369 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.142e-8■■■■■ 36.6
LSM11P83369 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC6.69□□□□□ -1.342e-8■■■■■ 36.6
LSM11P83369 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC6.59□□□□□ -1.352e-8■■■■■ 36.6
LSM11P83369 SRSF11-202ENST00000370950 3784 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.362e-8■■■■■ 36.6
LSM11P83369 ATP2B4-206ENST00000466407 388 ntTSL 36.01□□□□□ -1.452e-8■■■■■ 36.6
LSM11P83369 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.33□□□□□ -1.566e-16■■■■■ 36.6
LSM11P83369 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.35□□□□□ -0.272e-6■■■■■ 36.6
LSM11P83369 XPR1-202ENST00000367590 8474 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.912e-6■■■■■ 36.6
LSM11P83369 TBCD-204ENST00000571316 1509 ntTSL 1 (best)15.85■□□□□ 0.133e-7■■■■■ 36.5
LSM11P83369 TBCD-211ENST00000572984 682 ntTSL 59.39□□□□□ -0.913e-7■■■■■ 36.5
LSM11P83369 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.53■□□□□ 0.48e-9■■■■■ 36.5
LSM11P83369 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.61□□□□□ -0.238e-9■■■■■ 36.5
LSM11P83369 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.258e-9■■■■■ 36.5
LSM11P83369 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.298e-9■■■■■ 36.5
LSM11P83369 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC12.55□□□□□ -0.48e-9■■■■■ 36.5
LSM11P83369 PLEKHB2-209ENST00000482225 644 ntTSL 212.5□□□□□ -0.418e-9■■■■■ 36.5
LSM11P83369 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC12.07□□□□□ -0.488e-9■■■■■ 36.5
LSM11P83369 PLEKHB2-208ENST00000439822 4177 ntTSL 3 BASIC11.15□□□□□ -0.628e-9■■■■■ 36.5
LSM11P83369 PLEKHB2-201ENST00000234115 4208 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.898e-9■■■■■ 36.5
LSM11P83369 GSDMB-210ENST00000486560 318 ntTSL 310.5□□□□□ -0.736e-12■■■■■ 36.2
LSM11P83369 ADIPOR2-205ENST00000540974 480 ntTSL 315.33■□□□□ 0.047e-7■■■■■ 36.2
LSM11P83369 ADIPOR2-201ENST00000357103 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.687e-7■■■■■ 36.2
LSM11P83369 ADIPOR2-204ENST00000537545 484 ntTSL 39.3□□□□□ -0.927e-7■■■■■ 36.2
LSM11P83369 TBCD-207ENST00000571796 1940 ntTSL 1 (best)16.89■□□□□ 0.291e-7■■■■■ 36
LSM11P83369 TBCD-213ENST00000574422 879 ntTSL 210.16□□□□□ -0.781e-7■■■■■ 36
LSM11P83369 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC11.46□□□□□ -0.572e-6■■■■■ 36
LSM11P83369 PIBF1-207ENST00000615625 1098 ntTSL 1 (best) BASIC12.64□□□□□ -0.392e-15■■■■■ 35.7
LSM11P83369 PIBF1-201ENST00000326291 3154 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.962e-15■■■■■ 35.7
LSM11P83369 PIBF1-208ENST00000617689 2882 ntTSL 1 (best) BASIC7.35□□□□□ -1.232e-15■■■■■ 35.7
LSM11P83369 EIF4A1-206ENST00000577929 696 ntTSL 216.49■□□□□ 0.233e-8■■■■■ 35.7
LSM11P83369 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.151e-8■■■■■ 35.1
LSM11P83369 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.141e-8■■■■■ 35.1
LSM11P83369 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.73■□□□□ 0.592e-12■■■■■ 35
LSM11P83369 FNDC3B-207ENST00000469491 2916 ntTSL 216■□□□□ 0.152e-12■■■■■ 35
LSM11P83369 FNDC3B-208ENST00000476794 682 ntTSL 312.55□□□□□ -0.42e-12■■■■■ 35
LSM11P83369 FNDC3B-202ENST00000415807 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.662e-12■■■■■ 35
LSM11P83369 FNDC3B-206ENST00000443501 678 ntTSL 39.84□□□□□ -0.832e-12■■■■■ 35
LSM11P83369 FNDC3B-201ENST00000336824 7904 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.12e-12■■■■■ 35
LSM11P83369 FNDC3B-203ENST00000416957 3684 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.132e-12■■■■■ 35
LSM11P83369 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC7.25□□□□□ -1.252e-12■■■■■ 35
LSM11P83369 FNDC3B-209ENST00000478016 554 ntTSL 46.28□□□□□ -1.42e-12■■■■■ 35
LSM11P83369 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.211e-9■■■■■ 34.8
LSM11P83369 USB1-213ENST00000566292 575 ntTSL 215.86■□□□□ 0.131e-9■■■■■ 34.8
LSM11P83369 USB1-209ENST00000564387 558 ntTSL 415.23■□□□□ 0.031e-9■■■■■ 34.8
LSM11P83369 USB1-204ENST00000561568 671 ntTSL 414.52□□□□□ -0.091e-9■■■■■ 34.8
Retrieved 100 of 11,495 protein–RNA pairs in 164.6 ms