RNA–Protein interactions for RNA: ENST00000486560.1

GSDMB-210, Transcript of gasdermin B, humanhuman

TSL 3

Gene GSDMB, Length 318 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-210ENST00000486560 NISCHQ9Y2I1 1504 aa28.93■■■□□ 2.22
GSDMB-210ENST00000486560 CCDC180Q9P1Z9 1646 aa25.81■■□□□ 1.72
GSDMB-210ENST00000486560 ABCC9O60706 1549 aa25.35■■□□□ 1.65
GSDMB-210ENST00000486560 DCAF8L2P0C7V8 631 aa24.43■■□□□ 1.5
GSDMB-210ENST00000486560 RB1CC1Q8TDY2 1594 aa24.32■■□□□ 1.48
GSDMB-210ENST00000486560 NACADO15069 1562 aa24.2■■□□□ 1.47
GSDMB-210ENST00000486560 ZCCHC6Q5VYS8 1495 aaKnown RBP24.08■■□□□ 1.45
GSDMB-210ENST00000486560 MYO15BQ96JP2 1530 aa23.9■■□□□ 1.42
GSDMB-210ENST00000486560 UNC13AQ9UPW8 1703 aa23.89■■□□□ 1.41
GSDMB-210ENST00000486560 DCAF1Q9Y4B6 1507 aa23.83■■□□□ 1.41
GSDMB-210ENST00000486560 SCRIBQ14160 1630 aa23.67■■□□□ 1.38
GSDMB-210ENST00000486560 PABPN1Q86U42 306 aaKnown RBP eCLIP23.66■■□□□ 1.383e-15■■■□□ 16.8
GSDMB-210ENST00000486560 BICRAQ9NZM4 1560 aa23.51■■□□□ 1.35
GSDMB-210ENST00000486560 SHROOM4Q9ULL8 1493 aa23.16■■□□□ 1.3
GSDMB-210ENST00000486560 DNAJC5BQ9UF47 199 aa23.15■■□□□ 1.3
GSDMB-210ENST00000486560 EIF4G1Q04637 1599 aaKnown RBP22.94■■□□□ 1.26
GSDMB-210ENST00000486560 CC2D2AQ9P2K1 1620 aa22.9■■□□□ 1.26
GSDMB-210ENST00000486560 CECR2Q9BXF3 1484 aa22.72■■□□□ 1.23
GSDMB-210ENST00000486560 SMARCA4P51532 1647 aa22.53■■□□□ 1.2
GSDMB-210ENST00000486560 BAZ1AQ9NRL2 1556 aaPredicted RBP22.47■■□□□ 1.19
GSDMB-210ENST00000486560 SMARCA2P51531 1590 aa22.35■■□□□ 1.17
GSDMB-210ENST00000486560 MROH2BQ7Z745 1585 aa22.33■■□□□ 1.17
GSDMB-210ENST00000486560 ATAD2BQ9ULI0 1458 aa22.33■■□□□ 1.16
GSDMB-210ENST00000486560 NCAPD3P42695 1498 aa22.26■■□□□ 1.15
GSDMB-210ENST00000486560 BAZ1BQ9UIG0 1483 aaKnown RBP22.24■■□□□ 1.15
GSDMB-210ENST00000486560 HMGXB3Q12766 1538 aa22.22■■□□□ 1.15
GSDMB-210ENST00000486560 WIZO95785 1651 aa22.2■■□□□ 1.14
GSDMB-210ENST00000486560 PEG3Q9GZU2 1588 aa22.17■■□□□ 1.14
GSDMB-210ENST00000486560 RSF1Q96T23 1441 aaPredicted RBP22.01■■□□□ 1.11
GSDMB-210ENST00000486560 NESP48681 1621 aa21.9■■□□□ 1.1
GSDMB-210ENST00000486560 ERCC6Q03468 1493 aa21.9■■□□□ 1.1
GSDMB-210ENST00000486560 TOP2AP11388 1531 aaKnown RBP21.87■■□□□ 1.09
GSDMB-210ENST00000486560 LAMC3Q9Y6N6 1575 aa21.79■■□□□ 1.08
GSDMB-210ENST00000486560 KIF21AQ7Z4S6 1674 aa21.75■■□□□ 1.07
GSDMB-210ENST00000486560 CADPSQ9ULU8 1353 aa21.65■■□□□ 1.06
GSDMB-210ENST00000486560 SUPT5HO00267 1087 aaKnown RBP21.65■■□□□ 1.06
GSDMB-210ENST00000486560 PDS5BQ9NTI5 1447 aa21.63■■□□□ 1.05
GSDMB-210ENST00000486560 CCDC88BA6NC98 1476 aa21.58■■□□□ 1.05
GSDMB-210ENST00000486560 PRDM2Q13029 1718 aa21.58■■□□□ 1.05
GSDMB-210ENST00000486560 THOC2Q8NI27 1593 aaKnown RBP21.56■■□□□ 1.04
GSDMB-210ENST00000486560 CUX2O14529 1486 aa21.52■■□□□ 1.03
GSDMB-210ENST00000486560 CFTRP13569 1480 aa21.5■■□□□ 1.03
GSDMB-210ENST00000486560 FANCD2Q9BXW9 1451 aa21.49■■□□□ 1.03
GSDMB-210ENST00000486560 CEP164Q9UPV0 1460 aa21.49■■□□□ 1.03
GSDMB-210ENST00000486560 MRC2Q9UBG0 1479 aa21.44■■□□□ 1.02
GSDMB-210ENST00000486560 WDR62O43379 1518 aa21.33■■□□□ 1
GSDMB-210ENST00000486560 URB2Q14146 1524 aaKnown RBP21.26■□□□□ 0.99
GSDMB-210ENST00000486560 TOPBP1Q92547 1522 aa21.14■□□□□ 0.97
GSDMB-210ENST00000486560 DNMBPQ6XZF7 1577 aa21.13■□□□□ 0.97
GSDMB-210ENST00000486560 ABCC8Q09428 1581 aa21.09■□□□□ 0.97
GSDMB-210ENST00000486560 IFT140Q96RY7 1462 aa20.99■□□□□ 0.95
GSDMB-210ENST00000486560 CUX1P39880 1505 aa20.96■□□□□ 0.95
GSDMB-210ENST00000486560 POLA1P09884 1462 aaPredicted RBP20.94■□□□□ 0.94
GSDMB-210ENST00000486560 FGD5Q6ZNL6 1462 aa20.93■□□□□ 0.94
GSDMB-210ENST00000486560 ZNF608Q9ULD9 1512 aaPredicted RBP20.93■□□□□ 0.94
GSDMB-210ENST00000486560 EIF4G3O43432 1585 aaKnown RBP20.92■□□□□ 0.94
GSDMB-210ENST00000486560 RAD54L2Q9Y4B4 1467 aa20.9■□□□□ 0.94
GSDMB-210ENST00000486560 TARBP1Q13395 1621 aaKnown RBP20.89■□□□□ 0.94
GSDMB-210ENST00000486560 SOGA1O94964 1423 aa20.87■□□□□ 0.93
GSDMB-210ENST00000486560 DNAJC5Q9H3Z4 198 aa20.86■□□□□ 0.93
GSDMB-210ENST00000486560 WRNQ14191 1432 aaPredicted RBP eCLIP20.82■□□□□ 0.92
GSDMB-210ENST00000486560 SYNJ1O43426 1573 aa20.81■□□□□ 0.92
GSDMB-210ENST00000486560 BIVM-ERCC5R4GMW8 1640 aa20.81■□□□□ 0.92
GSDMB-210ENST00000486560 AQRO60306 1485 aaKnown RBP eCLIP20.81■□□□□ 0.92
GSDMB-210ENST00000486560 WDR97A6NE52 1622 aa20.78■□□□□ 0.92
GSDMB-210ENST00000486560 TOP2BQ02880 1626 aa20.78■□□□□ 0.92
GSDMB-210ENST00000486560 TDRD9Q8NDG6 1382 aaKnown RBP20.78■□□□□ 0.92
GSDMB-210ENST00000486560 CHD1O14646 1710 aa20.75■□□□□ 0.91
GSDMB-210ENST00000486560 PBRM1Q86U86 1689 aa20.74■□□□□ 0.91
GSDMB-210ENST00000486560 FBLN2P98095 1184 aa20.71■□□□□ 0.91
GSDMB-210ENST00000486560 SNAPC4Q5SXM2 1469 aa20.65■□□□□ 0.9
GSDMB-210ENST00000486560 OSCARQ8IYS5 282 aa20.65■□□□□ 0.9
GSDMB-210ENST00000486560 ABCA10Q8WWZ4 1543 aa20.64■□□□□ 0.9
GSDMB-210ENST00000486560 GAPVD1Q14C86 1478 aa20.63■□□□□ 0.89
GSDMB-210ENST00000486560 ABCA5Q8WWZ7 1642 aa20.63■□□□□ 0.89
GSDMB-210ENST00000486560 GRIN2BQ13224 1484 aa20.62■□□□□ 0.89
GSDMB-210ENST00000486560 CHMP7Q8WUX9 453 aaPredicted RBP20.55■□□□□ 0.88
GSDMB-210ENST00000486560 MAGI1Q96QZ7 1491 aaPredicted RBP20.55■□□□□ 0.88
GSDMB-210ENST00000486560 SYNJ2O15056 1496 aa20.48■□□□□ 0.87
GSDMB-210ENST00000486560 ADAMTS12P58397 1594 aa20.46■□□□□ 0.87
GSDMB-210ENST00000486560 RIMBP3CA6NJZ7 1639 aa20.42■□□□□ 0.86
GSDMB-210ENST00000486560 RIMBP3BA6NNM3 1639 aa20.42■□□□□ 0.86
GSDMB-210ENST00000486560 RIMBP3Q9UFD9 1639 aa20.42■□□□□ 0.86
GSDMB-210ENST00000486560 ERICH3Q5RHP9 1530 aa20.42■□□□□ 0.86
GSDMB-210ENST00000486560 TRIM41Q8WV44 630 aa20.41■□□□□ 0.86
GSDMB-210ENST00000486560 KIF27Q86VH2 1401 aa20.38■□□□□ 0.85
GSDMB-210ENST00000486560 GRIN2AQ12879 1464 aa20.37■□□□□ 0.85
GSDMB-210ENST00000486560 FHAD1B1AJZ9 1412 aa20.36■□□□□ 0.85
GSDMB-210ENST00000486560 ARHGEF11O15085 1522 aa20.35■□□□□ 0.85
GSDMB-210ENST00000486560 CLASP1Q7Z460 1538 aa20.32■□□□□ 0.84
GSDMB-210ENST00000486560 CUL7Q14999 1698 aa20.32■□□□□ 0.84
GSDMB-210ENST00000486560 CEP170Q5SW79 1584 aa20.29■□□□□ 0.84
GSDMB-210ENST00000486560 IGF1RP08069 1367 aa20.22■□□□□ 0.83
GSDMB-210ENST00000486560 RUSC2Q8N2Y8 1516 aa20.22■□□□□ 0.83
GSDMB-210ENST00000486560 CYB5RLQ6IPT4 315 aa20.2■□□□□ 0.82
GSDMB-210ENST00000486560 NUP160Q12769 1436 aa20.19■□□□□ 0.82
GSDMB-210ENST00000486560 CARMIL1Q5VZK9 1371 aa20.18■□□□□ 0.82
GSDMB-210ENST00000486560 ARAP1Q96P48 1450 aa20.17■□□□□ 0.82
GSDMB-210ENST00000486560 ERCC6L2Q5T890 1561 aa20.12■□□□□ 0.81
GSDMB-210ENST00000486560 SHROOM2Q13796 1616 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms