RNA–Protein interactions for RNA: ENST00000428228.5

EMD-203, Transcript of emerin, humanhuman

TSL 3

Gene EMD, Length 946 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMD-203ENST00000428228 NISCHQ9Y2I1 1504 aa43.01■■■■■ 4.48
EMD-203ENST00000428228 CCDC180Q9P1Z9 1646 aa38.65■■■■□ 3.78
EMD-203ENST00000428228 ABCC9O60706 1549 aa38.6■■■■□ 3.77
EMD-203ENST00000428228 RB1CC1Q8TDY2 1594 aa36.75■■■■□ 3.47
EMD-203ENST00000428228 NACADO15069 1562 aa36.5■■■■□ 3.43
EMD-203ENST00000428228 DCAF8L2P0C7V8 631 aa36.21■■■■□ 3.39
EMD-203ENST00000428228 DNAJC5BQ9UF47 199 aa36.2■■■■□ 3.39
EMD-203ENST00000428228 UNC13AQ9UPW8 1703 aa36.03■■■■□ 3.36
EMD-203ENST00000428228 MYO15BQ96JP2 1530 aa35.99■■■■□ 3.35
EMD-203ENST00000428228 PABPN1Q86U42 306 aaKnown RBP eCLIP35.89■■■■□ 3.341e-18■■■■■ 37.4
EMD-203ENST00000428228 BICRAQ9NZM4 1560 aa35.72■■■■□ 3.31
EMD-203ENST00000428228 ZCCHC6Q5VYS8 1495 aaKnown RBP35.66■■■■□ 3.3
EMD-203ENST00000428228 DCAF1Q9Y4B6 1507 aa35.53■■■■□ 3.28
EMD-203ENST00000428228 SHROOM4Q9ULL8 1493 aa35.2■■■■□ 3.23
EMD-203ENST00000428228 SCRIBQ14160 1630 aa35.18■■■■□ 3.22
EMD-203ENST00000428228 CC2D2AQ9P2K1 1620 aa34.9■■■■□ 3.18
EMD-203ENST00000428228 EIF4G1Q04637 1599 aaKnown RBP34.82■■■■□ 3.16
EMD-203ENST00000428228 CECR2Q9BXF3 1484 aa34.77■■■■□ 3.16
EMD-203ENST00000428228 NCAPD3P42695 1498 aa33.68■■■□□ 2.98
EMD-203ENST00000428228 ATAD2BQ9ULI0 1458 aa33.58■■■□□ 2.97
EMD-203ENST00000428228 SMARCA4P51532 1647 aa33.58■■■□□ 2.97
EMD-203ENST00000428228 SMARCA2P51531 1590 aa33.49■■■□□ 2.95
EMD-203ENST00000428228 HMGXB3Q12766 1538 aa33.46■■■□□ 2.95
EMD-203ENST00000428228 BAZ1AQ9NRL2 1556 aaPredicted RBP33.38■■■□□ 2.93
EMD-203ENST00000428228 ERCC6Q03468 1493 aa33.31■■■□□ 2.92
EMD-203ENST00000428228 CUX2O14529 1486 aa33.27■■■□□ 2.92
EMD-203ENST00000428228 PEG3Q9GZU2 1588 aa33.26■■■□□ 2.91
EMD-203ENST00000428228 BAZ1BQ9UIG0 1483 aaKnown RBP33.25■■■□□ 2.91
EMD-203ENST00000428228 DNAJC5Q9H3Z4 198 aa33.23■■■□□ 2.91
EMD-203ENST00000428228 NESP48681 1621 aa33.17■■■□□ 2.9
EMD-203ENST00000428228 MROH2BQ7Z745 1585 aa33.15■■■□□ 2.9
EMD-203ENST00000428228 LAMC3Q9Y6N6 1575 aa32.95■■■□□ 2.86
EMD-203ENST00000428228 THOC2Q8NI27 1593 aaKnown RBP32.87■■■□□ 2.85
EMD-203ENST00000428228 KIF21AQ7Z4S6 1674 aa32.8■■■□□ 2.84
EMD-203ENST00000428228 WIZO95785 1651 aa32.77■■■□□ 2.84
EMD-203ENST00000428228 PDS5BQ9NTI5 1447 aa32.7■■■□□ 2.83
EMD-203ENST00000428228 CADPSQ9ULU8 1353 aa32.64■■■□□ 2.82
EMD-203ENST00000428228 MRC2Q9UBG0 1479 aa32.46■■■□□ 2.79
EMD-203ENST00000428228 RSF1Q96T23 1441 aaPredicted RBP32.43■■■□□ 2.78
EMD-203ENST00000428228 WDR62O43379 1518 aa32.4■■■□□ 2.78
EMD-203ENST00000428228 TOP2AP11388 1531 aaKnown RBP32.34■■■□□ 2.77
EMD-203ENST00000428228 CEP164Q9UPV0 1460 aa32.32■■■□□ 2.76
EMD-203ENST00000428228 CFTRP13569 1480 aa32.29■■■□□ 2.76
EMD-203ENST00000428228 FANCD2Q9BXW9 1451 aa32.29■■■□□ 2.76
EMD-203ENST00000428228 PRDM2Q13029 1718 aa32.06■■■□□ 2.72
EMD-203ENST00000428228 URB2Q14146 1524 aaKnown RBP32.04■■■□□ 2.72
EMD-203ENST00000428228 CCDC88BA6NC98 1476 aa31.95■■■□□ 2.7
EMD-203ENST00000428228 TRIM41Q8WV44 630 aa31.75■■■□□ 2.67
EMD-203ENST00000428228 OSCARQ8IYS5 282 aa31.69■■■□□ 2.66
EMD-203ENST00000428228 TOPBP1Q92547 1522 aa31.69■■■□□ 2.66
EMD-203ENST00000428228 IFT140Q96RY7 1462 aa31.66■■■□□ 2.66
EMD-203ENST00000428228 ZNF608Q9ULD9 1512 aaPredicted RBP31.64■■■□□ 2.66
EMD-203ENST00000428228 ABCC8Q09428 1581 aa31.6■■■□□ 2.65
EMD-203ENST00000428228 DNMBPQ6XZF7 1577 aa31.58■■■□□ 2.65
EMD-203ENST00000428228 EIF4G3O43432 1585 aaKnown RBP31.5■■■□□ 2.63
EMD-203ENST00000428228 TARBP1Q13395 1621 aaKnown RBP31.44■■■□□ 2.62
EMD-203ENST00000428228 RIMBP3CA6NJZ7 1639 aa31.38■■■□□ 2.61
EMD-203ENST00000428228 RIMBP3BA6NNM3 1639 aa31.38■■■□□ 2.61
EMD-203ENST00000428228 RIMBP3Q9UFD9 1639 aa31.38■■■□□ 2.61
EMD-203ENST00000428228 POLA1P09884 1462 aaPredicted RBP31.36■■■□□ 2.61
EMD-203ENST00000428228 AQRO60306 1485 aaKnown RBP eCLIP31.33■■■□□ 2.611e-22■■■■■ 43.7
EMD-203ENST00000428228 CHD1O14646 1710 aa31.29■■■□□ 2.6
EMD-203ENST00000428228 ARHGEF11O15085 1522 aa31.26■■■□□ 2.59
EMD-203ENST00000428228 RAD54L2Q9Y4B4 1467 aa31.24■■■□□ 2.59
EMD-203ENST00000428228 SOGA1O94964 1423 aa31.18■■■□□ 2.58
EMD-203ENST00000428228 FGD5Q6ZNL6 1462 aa31.16■■■□□ 2.58
EMD-203ENST00000428228 CUX1P39880 1505 aa31.14■■■□□ 2.58
EMD-203ENST00000428228 SUPT5HO00267 1087 aaKnown RBP31.13■■■□□ 2.57
EMD-203ENST00000428228 TDRD9Q8NDG6 1382 aaKnown RBP31.13■■■□□ 2.57
EMD-203ENST00000428228 WDR97A6NE52 1622 aa31.1■■■□□ 2.57
EMD-203ENST00000428228 FBLN2P98095 1184 aa31.07■■■□□ 2.56
EMD-203ENST00000428228 SNAPC4Q5SXM2 1469 aa31.02■■■□□ 2.56
EMD-203ENST00000428228 CYB5RLQ6IPT4 315 aa30.96■■■□□ 2.55
EMD-203ENST00000428228 ARAP1Q96P48 1450 aa30.95■■■□□ 2.54
EMD-203ENST00000428228 MAGI1Q96QZ7 1491 aaPredicted RBP30.95■■■□□ 2.54
EMD-203ENST00000428228 GRIN2BQ13224 1484 aa30.93■■■□□ 2.54
EMD-203ENST00000428228 CLASP1Q7Z460 1538 aa30.9■■■□□ 2.54
EMD-203ENST00000428228 PBRM1Q86U86 1689 aa30.88■■■□□ 2.53
EMD-203ENST00000428228 SYNJ1O43426 1573 aa30.86■■■□□ 2.53
EMD-203ENST00000428228 CHMP7Q8WUX9 453 aaPredicted RBP30.85■■■□□ 2.53
EMD-203ENST00000428228 SYNJ2O15056 1496 aa30.83■■■□□ 2.53
EMD-203ENST00000428228 GAPVD1Q14C86 1478 aa30.82■■■□□ 2.53
EMD-203ENST00000428228 ABCA10Q8WWZ4 1543 aa30.81■■■□□ 2.52
EMD-203ENST00000428228 ABCA5Q8WWZ7 1642 aa30.8■■■□□ 2.52
EMD-203ENST00000428228 BIVM-ERCC5R4GMW8 1640 aa30.68■■■□□ 2.5
EMD-203ENST00000428228 TOP2BQ02880 1626 aa30.65■■■□□ 2.5
EMD-203ENST00000428228 WRNQ14191 1432 aaPredicted RBP eCLIP30.64■■■□□ 2.5
EMD-203ENST00000428228 TRHP20396 242 aaPredicted RBP30.6■■■□□ 2.49
EMD-203ENST00000428228 ADAMTS12P58397 1594 aa30.56■■■□□ 2.48
EMD-203ENST00000428228 GRIN2AQ12879 1464 aa30.55■■■□□ 2.48
EMD-203ENST00000428228 CEP170Q5SW79 1584 aa30.46■■■□□ 2.47
EMD-203ENST00000428228 NUP160Q12769 1436 aa30.45■■■□□ 2.46
EMD-203ENST00000428228 ERICH3Q5RHP9 1530 aa30.42■■■□□ 2.46
EMD-203ENST00000428228 ERCC6L2Q5T890 1561 aa30.42■■■□□ 2.46
EMD-203ENST00000428228 FHAD1B1AJZ9 1412 aa30.42■■■□□ 2.46
EMD-203ENST00000428228 SHROOM2Q13796 1616 aa30.36■■■□□ 2.45
EMD-203ENST00000428228 RUSC2Q8N2Y8 1516 aa30.14■■■□□ 2.42
EMD-203ENST00000428228 PRG4Q92954 1404 aaPredicted RBP30.13■■■□□ 2.41
EMD-203ENST00000428228 JPH4Q96JJ6 628 aa30.08■■■□□ 2.41
EMD-203ENST00000428228 KIF27Q86VH2 1401 aa30■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms