RNA–Protein interactions for RNA: ENST00000443742.1

SLC19A1-205, Transcript of solute carrier family 19 member 1, humanhuman

TSL 3

Gene SLC19A1, Length 777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC19A1-205ENST00000443742 NISCHQ9Y2I1 1504 aa38.76■■■■□ 3.8
SLC19A1-205ENST00000443742 ABCC9O60706 1549 aa34.74■■■■□ 3.15
SLC19A1-205ENST00000443742 CCDC180Q9P1Z9 1646 aa34.52■■■■□ 3.12
SLC19A1-205ENST00000443742 DNAJC5BQ9UF47 199 aa33■■■□□ 2.87
SLC19A1-205ENST00000443742 RB1CC1Q8TDY2 1594 aa32.83■■■□□ 2.85
SLC19A1-205ENST00000443742 NACADO15069 1562 aa32.49■■■□□ 2.79
SLC19A1-205ENST00000443742 DCAF8L2P0C7V8 631 aa32.31■■■□□ 2.76
SLC19A1-205ENST00000443742 PABPN1Q86U42 306 aaKnown RBP eCLIP32.3■■■□□ 2.76
SLC19A1-205ENST00000443742 ZCCHC6Q5VYS8 1495 aaKnown RBP32.29■■■□□ 2.76
SLC19A1-205ENST00000443742 MYO15BQ96JP2 1530 aa32.16■■■□□ 2.74
SLC19A1-205ENST00000443742 UNC13AQ9UPW8 1703 aa32.02■■■□□ 2.72
SLC19A1-205ENST00000443742 DCAF1Q9Y4B6 1507 aa32■■■□□ 2.71
SLC19A1-205ENST00000443742 BICRAQ9NZM4 1560 aa31.89■■■□□ 2.7
SLC19A1-205ENST00000443742 SCRIBQ14160 1630 aa31.55■■■□□ 2.64
SLC19A1-205ENST00000443742 SHROOM4Q9ULL8 1493 aa31.42■■■□□ 2.62
SLC19A1-205ENST00000443742 CECR2Q9BXF3 1484 aa31.34■■■□□ 2.61
SLC19A1-205ENST00000443742 CC2D2AQ9P2K1 1620 aa31.31■■■□□ 2.6
SLC19A1-205ENST00000443742 EIF4G1Q04637 1599 aaKnown RBP31.15■■■□□ 2.58
SLC19A1-205ENST00000443742 DNAJC5Q9H3Z4 198 aa30.63■■■□□ 2.49
SLC19A1-205ENST00000443742 SMARCA4P51532 1647 aa30.14■■■□□ 2.42
SLC19A1-205ENST00000443742 CUX2O14529 1486 aa30.12■■■□□ 2.41
SLC19A1-205ENST00000443742 ERCC6Q03468 1493 aa30.04■■■□□ 2.4
SLC19A1-205ENST00000443742 NCAPD3P42695 1498 aa30.03■■■□□ 2.4
SLC19A1-205ENST00000443742 BAZ1AQ9NRL2 1556 aaPredicted RBP29.98■■■□□ 2.39
SLC19A1-205ENST00000443742 ATAD2BQ9ULI0 1458 aa29.96■■■□□ 2.39
SLC19A1-205ENST00000443742 MROH2BQ7Z745 1585 aa29.95■■■□□ 2.39
SLC19A1-205ENST00000443742 SMARCA2P51531 1590 aa29.85■■■□□ 2.37
SLC19A1-205ENST00000443742 PEG3Q9GZU2 1588 aa29.81■■■□□ 2.36
SLC19A1-205ENST00000443742 HMGXB3Q12766 1538 aa29.78■■■□□ 2.36
SLC19A1-205ENST00000443742 NESP48681 1621 aa29.71■■■□□ 2.35
SLC19A1-205ENST00000443742 BAZ1BQ9UIG0 1483 aaKnown RBP29.66■■■□□ 2.34
SLC19A1-205ENST00000443742 WIZO95785 1651 aa29.66■■■□□ 2.34
SLC19A1-205ENST00000443742 RSF1Q96T23 1441 aaPredicted RBP29.5■■■□□ 2.31
SLC19A1-205ENST00000443742 THOC2Q8NI27 1593 aaKnown RBP29.46■■■□□ 2.31
SLC19A1-205ENST00000443742 LAMC3Q9Y6N6 1575 aa29.39■■■□□ 2.3
SLC19A1-205ENST00000443742 PDS5BQ9NTI5 1447 aa29.28■■■□□ 2.28
SLC19A1-205ENST00000443742 KIF21AQ7Z4S6 1674 aa29.23■■■□□ 2.27
SLC19A1-205ENST00000443742 TOP2AP11388 1531 aaKnown RBP29.22■■■□□ 2.27
SLC19A1-205ENST00000443742 TRIM41Q8WV44 630 aa29.13■■■□□ 2.25
SLC19A1-205ENST00000443742 CADPSQ9ULU8 1353 aa29.11■■■□□ 2.25
SLC19A1-205ENST00000443742 MRC2Q9UBG0 1479 aa29.04■■■□□ 2.24
SLC19A1-205ENST00000443742 WDR62O43379 1518 aa28.98■■■□□ 2.23
SLC19A1-205ENST00000443742 CCDC88BA6NC98 1476 aa28.9■■■□□ 2.22
SLC19A1-205ENST00000443742 CFTRP13569 1480 aa28.86■■■□□ 2.21
SLC19A1-205ENST00000443742 CEP164Q9UPV0 1460 aa28.85■■■□□ 2.21
SLC19A1-205ENST00000443742 FANCD2Q9BXW9 1451 aa28.78■■■□□ 2.2
SLC19A1-205ENST00000443742 PRDM2Q13029 1718 aa28.75■■■□□ 2.19
SLC19A1-205ENST00000443742 OSCARQ8IYS5 282 aa28.69■■■□□ 2.18
SLC19A1-205ENST00000443742 SUPT5HO00267 1087 aaKnown RBP28.59■■■□□ 2.17
SLC19A1-205ENST00000443742 URB2Q14146 1524 aaKnown RBP28.56■■■□□ 2.16
SLC19A1-205ENST00000443742 RIMBP3CA6NJZ7 1639 aa28.31■■■□□ 2.12
SLC19A1-205ENST00000443742 RIMBP3BA6NNM3 1639 aa28.31■■■□□ 2.12
SLC19A1-205ENST00000443742 RIMBP3Q9UFD9 1639 aa28.31■■■□□ 2.12
SLC19A1-205ENST00000443742 TOPBP1Q92547 1522 aa28.29■■■□□ 2.12
SLC19A1-205ENST00000443742 ZNF608Q9ULD9 1512 aaPredicted RBP28.29■■■□□ 2.12
SLC19A1-205ENST00000443742 IFT140Q96RY7 1462 aa28.28■■■□□ 2.12
SLC19A1-205ENST00000443742 DNMBPQ6XZF7 1577 aa28.23■■■□□ 2.11
SLC19A1-205ENST00000443742 ARHGEF11O15085 1522 aa28.21■■■□□ 2.11
SLC19A1-205ENST00000443742 ABCC8Q09428 1581 aa28.11■■■□□ 2.09
SLC19A1-205ENST00000443742 CUX1P39880 1505 aa28.1■■■□□ 2.09
SLC19A1-205ENST00000443742 EIF4G3O43432 1585 aaKnown RBP28.07■■■□□ 2.08
SLC19A1-205ENST00000443742 CYB5RLQ6IPT4 315 aa28.06■■■□□ 2.08
SLC19A1-205ENST00000443742 TARBP1Q13395 1621 aaKnown RBP28.06■■■□□ 2.08
SLC19A1-205ENST00000443742 POLA1P09884 1462 aaPredicted RBP28.04■■■□□ 2.08
SLC19A1-205ENST00000443742 AQRO60306 1485 aaKnown RBP eCLIP27.98■■■□□ 2.078e-9■■■■■ 38.8
SLC19A1-205ENST00000443742 RAD54L2Q9Y4B4 1467 aa27.96■■■□□ 2.07
SLC19A1-205ENST00000443742 FGD5Q6ZNL6 1462 aa27.95■■■□□ 2.07
SLC19A1-205ENST00000443742 FBLN2P98095 1184 aa27.92■■■□□ 2.06
SLC19A1-205ENST00000443742 ARAP1Q96P48 1450 aa27.9■■■□□ 2.06
SLC19A1-205ENST00000443742 CHD1O14646 1710 aa27.9■■■□□ 2.06
SLC19A1-205ENST00000443742 TRHP20396 242 aaPredicted RBP27.9■■■□□ 2.06
SLC19A1-205ENST00000443742 SOGA1O94964 1423 aa27.85■■■□□ 2.05
SLC19A1-205ENST00000443742 WDR97A6NE52 1622 aa27.85■■■□□ 2.05
SLC19A1-205ENST00000443742 SYNJ1O43426 1573 aa27.84■■■□□ 2.05
SLC19A1-205ENST00000443742 BIVM-ERCC5R4GMW8 1640 aa27.81■■■□□ 2.04
SLC19A1-205ENST00000443742 TOP2BQ02880 1626 aa27.77■■■□□ 2.04
SLC19A1-205ENST00000443742 TDRD9Q8NDG6 1382 aaKnown RBP27.76■■■□□ 2.03
SLC19A1-205ENST00000443742 WRNQ14191 1432 aaPredicted RBP eCLIP27.75■■■□□ 2.03
SLC19A1-205ENST00000443742 SNAPC4Q5SXM2 1469 aa27.68■■■□□ 2.02
SLC19A1-205ENST00000443742 ABCA10Q8WWZ4 1543 aa27.65■■■□□ 2.02
SLC19A1-205ENST00000443742 ABCA5Q8WWZ7 1642 aa27.63■■■□□ 2.01
SLC19A1-205ENST00000443742 CLASP1Q7Z460 1538 aa27.63■■■□□ 2.01
SLC19A1-205ENST00000443742 CHMP7Q8WUX9 453 aaPredicted RBP27.63■■■□□ 2.01
SLC19A1-205ENST00000443742 PBRM1Q86U86 1689 aa27.62■■■□□ 2.01
SLC19A1-205ENST00000443742 MAGI1Q96QZ7 1491 aaPredicted RBP27.57■■■□□ 2
SLC19A1-205ENST00000443742 GRIN2BQ13224 1484 aa27.54■■■□□ 2
SLC19A1-205ENST00000443742 GAPVD1Q14C86 1478 aa27.54■■■□□ 2
SLC19A1-205ENST00000443742 SYNJ2O15056 1496 aa27.5■■□□□ 1.99
SLC19A1-205ENST00000443742 AEBP2Q6ZN18 517 aaPredicted RBP27.42■■□□□ 1.98
SLC19A1-205ENST00000443742 ADAMTS12P58397 1594 aa27.35■■□□□ 1.97
SLC19A1-205ENST00000443742 ERICH3Q5RHP9 1530 aa27.29■■□□□ 1.96
SLC19A1-205ENST00000443742 GRIN2AQ12879 1464 aa27.22■■□□□ 1.95
SLC19A1-205ENST00000443742 CEP170Q5SW79 1584 aa27.19■■□□□ 1.94
SLC19A1-205ENST00000443742 FHAD1B1AJZ9 1412 aa27.19■■□□□ 1.94
SLC19A1-205ENST00000443742 ERCC6L2Q5T890 1561 aa27.18■■□□□ 1.94
SLC19A1-205ENST00000443742 NUP160Q12769 1436 aa27.12■■□□□ 1.93
SLC19A1-205ENST00000443742 IGF1RP08069 1367 aa27.11■■□□□ 1.93
SLC19A1-205ENST00000443742 KIF27Q86VH2 1401 aa27.11■■□□□ 1.93
SLC19A1-205ENST00000443742 RUSC2Q8N2Y8 1516 aa27.07■■□□□ 1.92
SLC19A1-205ENST00000443742 CUL7Q14999 1698 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms