RNA–Protein interactions for RNA: ENST00000369835.3

EMD-201, Transcript of emerin, humanhuman

TSL 3 BASIC

Gene EMD, Length 966 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EMD-201ENST00000369835 NISCHQ9Y2I1 1504 aa43.64■■■■■ 4.58
EMD-201ENST00000369835 CCDC180Q9P1Z9 1646 aa38.94■■■■□ 3.82
EMD-201ENST00000369835 ABCC9O60706 1549 aa38.24■■■■□ 3.71
EMD-201ENST00000369835 RB1CC1Q8TDY2 1594 aa36.73■■■■□ 3.47
EMD-201ENST00000369835 NACADO15069 1562 aa36.66■■■■□ 3.46
EMD-201ENST00000369835 MYO15BQ96JP2 1530 aa36.42■■■■□ 3.42
EMD-201ENST00000369835 DCAF8L2P0C7V8 631 aa36.35■■■■□ 3.41
EMD-201ENST00000369835 ZCCHC6Q5VYS8 1495 aaKnown RBP36.33■■■■□ 3.41
EMD-201ENST00000369835 DCAF1Q9Y4B6 1507 aa36.16■■■■□ 3.38
EMD-201ENST00000369835 UNC13AQ9UPW8 1703 aa35.9■■■■□ 3.34
EMD-201ENST00000369835 BICRAQ9NZM4 1560 aa35.68■■■■□ 3.3
EMD-201ENST00000369835 PABPN1Q86U42 306 aaKnown RBP eCLIP35.65■■■■□ 3.31e-18■■■■■ 37.4
EMD-201ENST00000369835 SCRIBQ14160 1630 aa35.43■■■■□ 3.26
EMD-201ENST00000369835 DNAJC5BQ9UF47 199 aa35.34■■■■□ 3.25
EMD-201ENST00000369835 SHROOM4Q9ULL8 1493 aa35.33■■■■□ 3.25
EMD-201ENST00000369835 EIF4G1Q04637 1599 aaKnown RBP34.73■■■■□ 3.15
EMD-201ENST00000369835 CC2D2AQ9P2K1 1620 aa34.63■■■■□ 3.13
EMD-201ENST00000369835 CECR2Q9BXF3 1484 aa34.42■■■■□ 3.1
EMD-201ENST00000369835 SMARCA4P51532 1647 aa33.91■■■■□ 3.02
EMD-201ENST00000369835 BAZ1AQ9NRL2 1556 aaPredicted RBP33.84■■■■□ 3.01
EMD-201ENST00000369835 NCAPD3P42695 1498 aa33.83■■■■□ 3.01
EMD-201ENST00000369835 ATAD2BQ9ULI0 1458 aa33.79■■■■□ 3
EMD-201ENST00000369835 SMARCA2P51531 1590 aa33.74■■■□□ 2.99
EMD-201ENST00000369835 HMGXB3Q12766 1538 aa33.66■■■□□ 2.98
EMD-201ENST00000369835 PEG3Q9GZU2 1588 aa33.64■■■□□ 2.98
EMD-201ENST00000369835 MROH2BQ7Z745 1585 aa33.61■■■□□ 2.97
EMD-201ENST00000369835 BAZ1BQ9UIG0 1483 aaKnown RBP33.47■■■□□ 2.95
EMD-201ENST00000369835 WIZO95785 1651 aa33.21■■■□□ 2.91
EMD-201ENST00000369835 RSF1Q96T23 1441 aaPredicted RBP33.14■■■□□ 2.9
EMD-201ENST00000369835 NESP48681 1621 aa33.05■■■□□ 2.88
EMD-201ENST00000369835 ERCC6Q03468 1493 aa32.97■■■□□ 2.87
EMD-201ENST00000369835 LAMC3Q9Y6N6 1575 aa32.96■■■□□ 2.87
EMD-201ENST00000369835 TOP2AP11388 1531 aaKnown RBP32.89■■■□□ 2.86
EMD-201ENST00000369835 CADPSQ9ULU8 1353 aa32.8■■■□□ 2.84
EMD-201ENST00000369835 CUX2O14529 1486 aa32.8■■■□□ 2.84
EMD-201ENST00000369835 PDS5BQ9NTI5 1447 aa32.72■■■□□ 2.83
EMD-201ENST00000369835 THOC2Q8NI27 1593 aaKnown RBP32.66■■■□□ 2.82
EMD-201ENST00000369835 KIF21AQ7Z4S6 1674 aa32.66■■■□□ 2.82
EMD-201ENST00000369835 CFTRP13569 1480 aa32.58■■■□□ 2.81
EMD-201ENST00000369835 CCDC88BA6NC98 1476 aa32.47■■■□□ 2.79
EMD-201ENST00000369835 MRC2Q9UBG0 1479 aa32.42■■■□□ 2.78
EMD-201ENST00000369835 FANCD2Q9BXW9 1451 aa32.42■■■□□ 2.78
EMD-201ENST00000369835 CEP164Q9UPV0 1460 aa32.4■■■□□ 2.78
EMD-201ENST00000369835 WDR62O43379 1518 aa32.36■■■□□ 2.77
EMD-201ENST00000369835 PRDM2Q13029 1718 aa32.31■■■□□ 2.76
EMD-201ENST00000369835 URB2Q14146 1524 aaKnown RBP32.12■■■□□ 2.73
EMD-201ENST00000369835 DNAJC5Q9H3Z4 198 aa32.04■■■□□ 2.72
EMD-201ENST00000369835 SUPT5HO00267 1087 aaKnown RBP31.96■■■□□ 2.71
EMD-201ENST00000369835 TOPBP1Q92547 1522 aa31.88■■■□□ 2.69
EMD-201ENST00000369835 ABCC8Q09428 1581 aa31.86■■■□□ 2.69
EMD-201ENST00000369835 DNMBPQ6XZF7 1577 aa31.83■■■□□ 2.69
EMD-201ENST00000369835 IFT140Q96RY7 1462 aa31.74■■■□□ 2.67
EMD-201ENST00000369835 ZNF608Q9ULD9 1512 aaPredicted RBP31.61■■■□□ 2.65
EMD-201ENST00000369835 POLA1P09884 1462 aaPredicted RBP31.6■■■□□ 2.65
EMD-201ENST00000369835 TARBP1Q13395 1621 aaKnown RBP31.58■■■□□ 2.65
EMD-201ENST00000369835 CUX1P39880 1505 aa31.55■■■□□ 2.64
EMD-201ENST00000369835 EIF4G3O43432 1585 aaKnown RBP31.49■■■□□ 2.63
EMD-201ENST00000369835 FGD5Q6ZNL6 1462 aa31.47■■■□□ 2.63
EMD-201ENST00000369835 RAD54L2Q9Y4B4 1467 aa31.43■■■□□ 2.62
EMD-201ENST00000369835 SOGA1O94964 1423 aa31.41■■■□□ 2.62
EMD-201ENST00000369835 AQRO60306 1485 aaKnown RBP eCLIP31.37■■■□□ 2.611e-22■■■■■ 43.7
EMD-201ENST00000369835 WDR97A6NE52 1622 aa31.35■■■□□ 2.61
EMD-201ENST00000369835 OSCARQ8IYS5 282 aa31.31■■■□□ 2.6
EMD-201ENST00000369835 TDRD9Q8NDG6 1382 aaKnown RBP31.27■■■□□ 2.6
EMD-201ENST00000369835 WRNQ14191 1432 aaPredicted RBP eCLIP31.24■■■□□ 2.59
EMD-201ENST00000369835 TOP2BQ02880 1626 aa31.23■■■□□ 2.59
EMD-201ENST00000369835 BIVM-ERCC5R4GMW8 1640 aa31.23■■■□□ 2.59
EMD-201ENST00000369835 SYNJ1O43426 1573 aa31.19■■■□□ 2.58
EMD-201ENST00000369835 ABCA10Q8WWZ4 1543 aa31.18■■■□□ 2.58
EMD-201ENST00000369835 CHD1O14646 1710 aa31.12■■■□□ 2.57
EMD-201ENST00000369835 GRIN2BQ13224 1484 aa31.11■■■□□ 2.57
EMD-201ENST00000369835 ABCA5Q8WWZ7 1642 aa31.09■■■□□ 2.57
EMD-201ENST00000369835 SNAPC4Q5SXM2 1469 aa31.09■■■□□ 2.57
EMD-201ENST00000369835 MAGI1Q96QZ7 1491 aaPredicted RBP31.08■■■□□ 2.57
EMD-201ENST00000369835 GAPVD1Q14C86 1478 aa31.07■■■□□ 2.56
EMD-201ENST00000369835 PBRM1Q86U86 1689 aa31.03■■■□□ 2.56
EMD-201ENST00000369835 SYNJ2O15056 1496 aa30.95■■■□□ 2.55
EMD-201ENST00000369835 FBLN2P98095 1184 aa30.94■■■□□ 2.54
EMD-201ENST00000369835 RIMBP3CA6NJZ7 1639 aa30.88■■■□□ 2.53
EMD-201ENST00000369835 RIMBP3BA6NNM3 1639 aa30.88■■■□□ 2.53
EMD-201ENST00000369835 RIMBP3Q9UFD9 1639 aa30.88■■■□□ 2.53
EMD-201ENST00000369835 CHMP7Q8WUX9 453 aaPredicted RBP30.87■■■□□ 2.53
EMD-201ENST00000369835 ARHGEF11O15085 1522 aa30.87■■■□□ 2.53
EMD-201ENST00000369835 CLASP1Q7Z460 1538 aa30.83■■■□□ 2.53
EMD-201ENST00000369835 ADAMTS12P58397 1594 aa30.8■■■□□ 2.52
EMD-201ENST00000369835 ERICH3Q5RHP9 1530 aa30.8■■■□□ 2.52
EMD-201ENST00000369835 TRIM41Q8WV44 630 aa30.76■■■□□ 2.51
EMD-201ENST00000369835 GRIN2AQ12879 1464 aa30.72■■■□□ 2.51
EMD-201ENST00000369835 FHAD1B1AJZ9 1412 aa30.72■■■□□ 2.51
EMD-201ENST00000369835 NUP160Q12769 1436 aa30.63■■■□□ 2.49
EMD-201ENST00000369835 ARAP1Q96P48 1450 aa30.61■■■□□ 2.49
EMD-201ENST00000369835 KIF27Q86VH2 1401 aa30.59■■■□□ 2.49
EMD-201ENST00000369835 CEP170Q5SW79 1584 aa30.58■■■□□ 2.49
EMD-201ENST00000369835 IGF1RP08069 1367 aa30.52■■■□□ 2.48
EMD-201ENST00000369835 CYB5RLQ6IPT4 315 aa30.5■■■□□ 2.47
EMD-201ENST00000369835 CUL7Q14999 1698 aa30.46■■■□□ 2.47
EMD-201ENST00000369835 SHROOM2Q13796 1616 aa30.44■■■□□ 2.46
EMD-201ENST00000369835 RUSC2Q8N2Y8 1516 aa30.37■■■□□ 2.45
EMD-201ENST00000369835 ERCC6L2Q5T890 1561 aa30.34■■■□□ 2.45
EMD-201ENST00000369835 CARMIL1Q5VZK9 1371 aa30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms