Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 LINC01003-201ENST00000564834 1764 ntBASIC25.07■■□□□ 1.6
NPHS1O60500 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.07■■□□□ 1.6
NPHS1O60500 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
NPHS1O60500 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.06■■□□□ 1.6
NPHS1O60500 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
NPHS1O60500 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
NPHS1O60500 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
NPHS1O60500 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
NPHS1O60500 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
NPHS1O60500 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
NPHS1O60500 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.02■■□□□ 1.6
NPHS1O60500 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC25.02■■□□□ 1.6
NPHS1O60500 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC25.02■■□□□ 1.6
NPHS1O60500 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC25.02■■□□□ 1.6
NPHS1O60500 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
NPHS1O60500 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
NPHS1O60500 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
NPHS1O60500 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
NPHS1O60500 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25■■□□□ 1.59
NPHS1O60500 AC100797.4-201ENST00000631653 1827 ntBASIC25■■□□□ 1.59
NPHS1O60500 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
NPHS1O60500 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
NPHS1O60500 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25■■□□□ 1.59
NPHS1O60500 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
NPHS1O60500 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
NPHS1O60500 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.98■■□□□ 1.59
NPHS1O60500 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.98■■□□□ 1.59
NPHS1O60500 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
NPHS1O60500 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
NPHS1O60500 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC24.98■■□□□ 1.59
NPHS1O60500 AC136428.2-201ENST00000563187 214 ntBASIC24.98■■□□□ 1.59
NPHS1O60500 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
NPHS1O60500 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
NPHS1O60500 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
NPHS1O60500 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.97■■□□□ 1.59
NPHS1O60500 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.97■■□□□ 1.59
NPHS1O60500 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
NPHS1O60500 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
NPHS1O60500 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
NPHS1O60500 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
NPHS1O60500 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
NPHS1O60500 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
NPHS1O60500 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.94■■□□□ 1.58
NPHS1O60500 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
NPHS1O60500 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
NPHS1O60500 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
NPHS1O60500 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC24.93■■□□□ 1.58
NPHS1O60500 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
NPHS1O60500 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
NPHS1O60500 AP002414.2-202ENST00000590929 1450 ntBASIC24.92■■□□□ 1.58
NPHS1O60500 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC24.92■■□□□ 1.58
NPHS1O60500 AC097358.2-201ENST00000607541 1159 ntBASIC24.92■■□□□ 1.58
NPHS1O60500 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
NPHS1O60500 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
NPHS1O60500 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
NPHS1O60500 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
NPHS1O60500 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.9■■□□□ 1.58
NPHS1O60500 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
NPHS1O60500 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.9■■□□□ 1.58
NPHS1O60500 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
NPHS1O60500 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
NPHS1O60500 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
NPHS1O60500 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC24.9■■□□□ 1.58
NPHS1O60500 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
NPHS1O60500 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
NPHS1O60500 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
NPHS1O60500 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.89■■□□□ 1.58
NPHS1O60500 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
NPHS1O60500 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.89■■□□□ 1.58
NPHS1O60500 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
NPHS1O60500 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.89■■□□□ 1.57
NPHS1O60500 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
NPHS1O60500 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.88■■□□□ 1.57
NPHS1O60500 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.87■■□□□ 1.57
NPHS1O60500 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.87■■□□□ 1.57
NPHS1O60500 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
NPHS1O60500 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC24.87■■□□□ 1.57
NPHS1O60500 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
NPHS1O60500 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.87■■□□□ 1.57
NPHS1O60500 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
NPHS1O60500 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
NPHS1O60500 MIR762-201ENST00000390236 83 ntBASIC24.84■■□□□ 1.57
NPHS1O60500 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
NPHS1O60500 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.84■■□□□ 1.57
NPHS1O60500 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.84■■□□□ 1.57
NPHS1O60500 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
NPHS1O60500 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC24.83■■□□□ 1.57
NPHS1O60500 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC24.83■■□□□ 1.57
NPHS1O60500 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
NPHS1O60500 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.82■■□□□ 1.56
NPHS1O60500 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
NPHS1O60500 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.82■■□□□ 1.56
NPHS1O60500 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.82■■□□□ 1.56
NPHS1O60500 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.81■■□□□ 1.56
NPHS1O60500 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
NPHS1O60500 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
NPHS1O60500 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
NPHS1O60500 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.8■■□□□ 1.56
NPHS1O60500 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
NPHS1O60500 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms