Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF223E7ERA6 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF223E7ERA6 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RNF223E7ERA6 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RNF223E7ERA6 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF223E7ERA6 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RNF223E7ERA6 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.53■■□□□ 1.04
RNF223E7ERA6 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
RNF223E7ERA6 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC21.52■■□□□ 1.04
RNF223E7ERA6 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
RNF223E7ERA6 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RNF223E7ERA6 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
RNF223E7ERA6 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
RNF223E7ERA6 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.51■■□□□ 1.03
RNF223E7ERA6 AL033527.3-201ENST00000566366 1196 ntBASIC21.51■■□□□ 1.03
RNF223E7ERA6 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RNF223E7ERA6 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
RNF223E7ERA6 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
RNF223E7ERA6 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RNF223E7ERA6 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF223E7ERA6 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
RNF223E7ERA6 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC21.49■■□□□ 1.03
RNF223E7ERA6 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.49■■□□□ 1.03
RNF223E7ERA6 AC127502.1-201ENST00000399971 1502 ntBASIC21.49■■□□□ 1.03
RNF223E7ERA6 WHAMMP2-203ENST00000563942 1603 ntBASIC21.48■■□□□ 1.03
RNF223E7ERA6 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
RNF223E7ERA6 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF223E7ERA6 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF223E7ERA6 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
RNF223E7ERA6 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.47■■□□□ 1.03
RNF223E7ERA6 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
RNF223E7ERA6 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
RNF223E7ERA6 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
RNF223E7ERA6 AC135983.2-203ENST00000454486 1613 ntBASIC21.46■■□□□ 1.03
RNF223E7ERA6 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.46■■□□□ 1.03
RNF223E7ERA6 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
RNF223E7ERA6 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC21.46■■□□□ 1.03
RNF223E7ERA6 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
RNF223E7ERA6 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.45■■□□□ 1.02
RNF223E7ERA6 U85056.1-201ENST00000616429 682 ntBASIC21.45■■□□□ 1.02
RNF223E7ERA6 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF223E7ERA6 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF223E7ERA6 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RNF223E7ERA6 AC060814.1-201ENST00000554326 538 ntBASIC21.43■■□□□ 1.02
RNF223E7ERA6 AC018358.1-201ENST00000631079 1402 ntBASIC21.43■■□□□ 1.02
RNF223E7ERA6 AC110285.7-201ENST00000624417 1536 ntBASIC21.43■■□□□ 1.02
RNF223E7ERA6 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
RNF223E7ERA6 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.42■■□□□ 1.02
RNF223E7ERA6 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
RNF223E7ERA6 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RNF223E7ERA6 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
RNF223E7ERA6 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC21.41■■□□□ 1.02
RNF223E7ERA6 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
RNF223E7ERA6 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RNF223E7ERA6 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC21.4■■□□□ 1.02
RNF223E7ERA6 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RNF223E7ERA6 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.39■■□□□ 1.01
RNF223E7ERA6 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RNF223E7ERA6 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RNF223E7ERA6 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.38■■□□□ 1.01
RNF223E7ERA6 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC21.38■■□□□ 1.01
RNF223E7ERA6 AC148477.6-201ENST00000623746 465 ntBASIC21.38■■□□□ 1.01
RNF223E7ERA6 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RNF223E7ERA6 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RNF223E7ERA6 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
RNF223E7ERA6 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC21.36■■□□□ 1.01
RNF223E7ERA6 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
RNF223E7ERA6 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC21.36■■□□□ 1.01
RNF223E7ERA6 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.36■■□□□ 1.01
RNF223E7ERA6 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
RNF223E7ERA6 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.35■■□□□ 1.01
RNF223E7ERA6 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.35■■□□□ 1.01
RNF223E7ERA6 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
RNF223E7ERA6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC21.34■■□□□ 1.01
RNF223E7ERA6 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF223E7ERA6 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
RNF223E7ERA6 TSPY13P-201ENST00000338964 914 ntBASIC21.33■■□□□ 1.01
RNF223E7ERA6 MIR219A2-201ENST00000608502 1504 ntBASIC21.33■■□□□ 1
RNF223E7ERA6 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
RNF223E7ERA6 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
RNF223E7ERA6 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.32■■□□□ 1
RNF223E7ERA6 GFER-205ENST00000569451 517 ntTSL 5 BASIC21.32■■□□□ 1
RNF223E7ERA6 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.32■■□□□ 1
RNF223E7ERA6 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF223E7ERA6 KRT18P60-201ENST00000312876 1297 ntBASIC21.31■■□□□ 1
RNF223E7ERA6 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.31■■□□□ 1
RNF223E7ERA6 AC004987.1-201ENST00000428627 508 ntBASIC21.31■■□□□ 1
RNF223E7ERA6 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC21.31■■□□□ 1
RNF223E7ERA6 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RNF223E7ERA6 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.3■■□□□ 1
RNF223E7ERA6 RPS2-210ENST00000530225 765 ntTSL 2 BASIC21.3■■□□□ 1
RNF223E7ERA6 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
RNF223E7ERA6 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RNF223E7ERA6 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.29■■□□□ 1
RNF223E7ERA6 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RNF223E7ERA6 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.29■■□□□ 1
RNF223E7ERA6 ATP5G2P3-201ENST00000429083 425 ntBASIC21.29■■□□□ 1
RNF223E7ERA6 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RNF223E7ERA6 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
RNF223E7ERA6 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms