Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV13-1A0A0B4J241 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV13-1A0A0B4J241 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRAV13-1A0A0B4J241 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TRAV13-1A0A0B4J241 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAV13-1A0A0B4J241 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV13-1A0A0B4J241 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRAV13-1A0A0B4J241 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV13-1A0A0B4J241 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV13-1A0A0B4J241 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAV13-1A0A0B4J241 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRAV13-1A0A0B4J241 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC17.66■□□□□ 0.42
TRAV13-1A0A0B4J241 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV13-1A0A0B4J241 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV13-1A0A0B4J241 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV13-1A0A0B4J241 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRAV13-1A0A0B4J241 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
TRAV13-1A0A0B4J241 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC17.64■□□□□ 0.41
TRAV13-1A0A0B4J241 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC17.64■□□□□ 0.41
TRAV13-1A0A0B4J241 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV13-1A0A0B4J241 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRAV13-1A0A0B4J241 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC17.64■□□□□ 0.41
TRAV13-1A0A0B4J241 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV13-1A0A0B4J241 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TRAV13-1A0A0B4J241 BX255925.1-201ENST00000566954 1854 ntBASIC17.63■□□□□ 0.41
TRAV13-1A0A0B4J241 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC17.63■□□□□ 0.41
TRAV13-1A0A0B4J241 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV13-1A0A0B4J241 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV13-1A0A0B4J241 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRAV13-1A0A0B4J241 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV13-1A0A0B4J241 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV13-1A0A0B4J241 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV13-1A0A0B4J241 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV13-1A0A0B4J241 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV13-1A0A0B4J241 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV13-1A0A0B4J241 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC17.62■□□□□ 0.41
TRAV13-1A0A0B4J241 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRAV13-1A0A0B4J241 CREM-210ENST00000374721 2020 ntTSL 5 BASIC17.62■□□□□ 0.41
TRAV13-1A0A0B4J241 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TRAV13-1A0A0B4J241 RARRES2P7-201ENST00000567349 469 ntBASIC17.61■□□□□ 0.41
TRAV13-1A0A0B4J241 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV13-1A0A0B4J241 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV13-1A0A0B4J241 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV13-1A0A0B4J241 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRAV13-1A0A0B4J241 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC17.6■□□□□ 0.41
TRAV13-1A0A0B4J241 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV13-1A0A0B4J241 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAV13-1A0A0B4J241 AP004833.2-201ENST00000532228 1454 ntBASIC17.6■□□□□ 0.41
TRAV13-1A0A0B4J241 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV13-1A0A0B4J241 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC17.6■□□□□ 0.41
TRAV13-1A0A0B4J241 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV13-1A0A0B4J241 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV13-1A0A0B4J241 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV13-1A0A0B4J241 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRAV13-1A0A0B4J241 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV13-1A0A0B4J241 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV13-1A0A0B4J241 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV13-1A0A0B4J241 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV13-1A0A0B4J241 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TRAV13-1A0A0B4J241 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TRAV13-1A0A0B4J241 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRAV13-1A0A0B4J241 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.41
TRAV13-1A0A0B4J241 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV13-1A0A0B4J241 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
TRAV13-1A0A0B4J241 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
TRAV13-1A0A0B4J241 PROC-203ENST00000409048 1586 ntTSL 5 BASIC17.58■□□□□ 0.41
TRAV13-1A0A0B4J241 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRAV13-1A0A0B4J241 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV13-1A0A0B4J241 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV13-1A0A0B4J241 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TRAV13-1A0A0B4J241 SETD8P1-201ENST00000623146 1180 ntBASIC17.58■□□□□ 0.4
TRAV13-1A0A0B4J241 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV13-1A0A0B4J241 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRAV13-1A0A0B4J241 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV13-1A0A0B4J241 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TRAV13-1A0A0B4J241 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
TRAV13-1A0A0B4J241 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.57■□□□□ 0.4
TRAV13-1A0A0B4J241 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV13-1A0A0B4J241 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV13-1A0A0B4J241 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC17.56■□□□□ 0.4
TRAV13-1A0A0B4J241 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV13-1A0A0B4J241 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV13-1A0A0B4J241 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV13-1A0A0B4J241 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV13-1A0A0B4J241 AC127502.1-201ENST00000399971 1502 ntBASIC17.56■□□□□ 0.4
TRAV13-1A0A0B4J241 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC17.56■□□□□ 0.4
TRAV13-1A0A0B4J241 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV13-1A0A0B4J241 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV13-1A0A0B4J241 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TRAV13-1A0A0B4J241 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV13-1A0A0B4J241 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV13-1A0A0B4J241 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC17.55■□□□□ 0.4
TRAV13-1A0A0B4J241 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV13-1A0A0B4J241 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV13-1A0A0B4J241 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV13-1A0A0B4J241 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TRAV13-1A0A0B4J241 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC17.54■□□□□ 0.4
TRAV13-1A0A0B4J241 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TRAV13-1A0A0B4J241 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC17.54■□□□□ 0.4
TRAV13-1A0A0B4J241 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms