Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
TRAV18A0A075B6X5 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
TRAV18A0A075B6X5 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRAV18A0A075B6X5 AL133380.1-201ENST00000506013 324 ntBASIC21.95■■□□□ 1.1
TRAV18A0A075B6X5 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.95■■□□□ 1.1
TRAV18A0A075B6X5 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
TRAV18A0A075B6X5 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
TRAV18A0A075B6X5 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TRAV18A0A075B6X5 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
TRAV18A0A075B6X5 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.94■■□□□ 1.1
TRAV18A0A075B6X5 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRAV18A0A075B6X5 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.94■■□□□ 1.1
TRAV18A0A075B6X5 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
TRAV18A0A075B6X5 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
TRAV18A0A075B6X5 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.93■■□□□ 1.1
TRAV18A0A075B6X5 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
TRAV18A0A075B6X5 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
TRAV18A0A075B6X5 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.93■■□□□ 1.1
TRAV18A0A075B6X5 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC21.93■■□□□ 1.1
TRAV18A0A075B6X5 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC21.93■■□□□ 1.1
TRAV18A0A075B6X5 LINC01003-201ENST00000564834 1764 ntBASIC21.93■■□□□ 1.1
TRAV18A0A075B6X5 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.93■■□□□ 1.1
TRAV18A0A075B6X5 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
TRAV18A0A075B6X5 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
TRAV18A0A075B6X5 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
TRAV18A0A075B6X5 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.91■■□□□ 1.1
TRAV18A0A075B6X5 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
TRAV18A0A075B6X5 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC21.91■■□□□ 1.1
TRAV18A0A075B6X5 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.9■■□□□ 1.1
TRAV18A0A075B6X5 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
TRAV18A0A075B6X5 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRAV18A0A075B6X5 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRAV18A0A075B6X5 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRAV18A0A075B6X5 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
TRAV18A0A075B6X5 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
TRAV18A0A075B6X5 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.9■■□□□ 1.1
TRAV18A0A075B6X5 KLF16-203ENST00000592313 508 ntTSL 3 BASIC21.89■■□□□ 1.09
TRAV18A0A075B6X5 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC21.89■■□□□ 1.09
TRAV18A0A075B6X5 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.89■■□□□ 1.09
TRAV18A0A075B6X5 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.89■■□□□ 1.09
TRAV18A0A075B6X5 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRAV18A0A075B6X5 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRAV18A0A075B6X5 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC21.88■■□□□ 1.09
TRAV18A0A075B6X5 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRAV18A0A075B6X5 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TRAV18A0A075B6X5 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRAV18A0A075B6X5 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
TRAV18A0A075B6X5 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
TRAV18A0A075B6X5 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
TRAV18A0A075B6X5 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
TRAV18A0A075B6X5 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRAV18A0A075B6X5 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
TRAV18A0A075B6X5 AL449106.1-201ENST00000608517 1980 ntBASIC21.87■■□□□ 1.09
TRAV18A0A075B6X5 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
TRAV18A0A075B6X5 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC21.86■■□□□ 1.09
TRAV18A0A075B6X5 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.86■■□□□ 1.09
TRAV18A0A075B6X5 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
TRAV18A0A075B6X5 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.86■■□□□ 1.09
TRAV18A0A075B6X5 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
TRAV18A0A075B6X5 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRAV18A0A075B6X5 C1orf122-204ENST00000468084 1234 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
TRAV18A0A075B6X5 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
TRAV18A0A075B6X5 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
TRAV18A0A075B6X5 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.84■■□□□ 1.09
TRAV18A0A075B6X5 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
TRAV18A0A075B6X5 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRAV18A0A075B6X5 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
TRAV18A0A075B6X5 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
TRAV18A0A075B6X5 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.82■■□□□ 1.08
TRAV18A0A075B6X5 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRAV18A0A075B6X5 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC21.81■■□□□ 1.08
TRAV18A0A075B6X5 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
TRAV18A0A075B6X5 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC21.81■■□□□ 1.08
TRAV18A0A075B6X5 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
TRAV18A0A075B6X5 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TRAV18A0A075B6X5 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
TRAV18A0A075B6X5 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.8■■□□□ 1.08
TRAV18A0A075B6X5 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TRAV18A0A075B6X5 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.79■■□□□ 1.08
TRAV18A0A075B6X5 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TRAV18A0A075B6X5 AC127502.1-201ENST00000399971 1502 ntBASIC21.79■■□□□ 1.08
TRAV18A0A075B6X5 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TRAV18A0A075B6X5 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.78■■□□□ 1.08
TRAV18A0A075B6X5 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRAV18A0A075B6X5 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRAV18A0A075B6X5 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRAV18A0A075B6X5 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRAV18A0A075B6X5 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TRAV18A0A075B6X5 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
TRAV18A0A075B6X5 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TRAV18A0A075B6X5 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC21.76■■□□□ 1.07
TRAV18A0A075B6X5 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TRAV18A0A075B6X5 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
TRAV18A0A075B6X5 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRAV18A0A075B6X5 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.75■■□□□ 1.07
TRAV18A0A075B6X5 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TRAV18A0A075B6X5 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.75■■□□□ 1.07
TRAV18A0A075B6X5 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAV18A0A075B6X5 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TRAV18A0A075B6X5 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms