Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
VPS25Q9BRG1 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VPS25Q9BRG1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
VPS25Q9BRG1 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
VPS25Q9BRG1 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.73□□□□□ -0.21
VPS25Q9BRG1 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
VPS25Q9BRG1 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
VPS25Q9BRG1 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
VPS25Q9BRG1 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
VPS25Q9BRG1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC13.73□□□□□ -0.21
VPS25Q9BRG1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC13.73□□□□□ -0.21
VPS25Q9BRG1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VPS25Q9BRG1 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
VPS25Q9BRG1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC13.72□□□□□ -0.21
VPS25Q9BRG1 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC13.72□□□□□ -0.21
VPS25Q9BRG1 AC009113.1-201ENST00000570267 2443 ntBASIC13.72□□□□□ -0.21
VPS25Q9BRG1 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
VPS25Q9BRG1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VPS25Q9BRG1 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VPS25Q9BRG1 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VPS25Q9BRG1 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.72□□□□□ -0.21
VPS25Q9BRG1 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VPS25Q9BRG1 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC13.72□□□□□ -0.21
VPS25Q9BRG1 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VPS25Q9BRG1 AC008813.1-201ENST00000536597 885 ntBASIC13.72□□□□□ -0.21
VPS25Q9BRG1 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC13.72□□□□□ -0.21
VPS25Q9BRG1 OXCT2P1-201ENST00000447263 1535 ntBASIC13.72□□□□□ -0.21
VPS25Q9BRG1 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VPS25Q9BRG1 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
VPS25Q9BRG1 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
VPS25Q9BRG1 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
VPS25Q9BRG1 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VPS25Q9BRG1 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VPS25Q9BRG1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VPS25Q9BRG1 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC13.72□□□□□ -0.21
VPS25Q9BRG1 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
VPS25Q9BRG1 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
VPS25Q9BRG1 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
VPS25Q9BRG1 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
VPS25Q9BRG1 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
VPS25Q9BRG1 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
VPS25Q9BRG1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC13.71□□□□□ -0.21
VPS25Q9BRG1 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
VPS25Q9BRG1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
VPS25Q9BRG1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
VPS25Q9BRG1 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VPS25Q9BRG1 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
VPS25Q9BRG1 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
VPS25Q9BRG1 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.21
VPS25Q9BRG1 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.71□□□□□ -0.21
VPS25Q9BRG1 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VPS25Q9BRG1 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
VPS25Q9BRG1 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
VPS25Q9BRG1 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
VPS25Q9BRG1 MIR3665-201ENST00000578708 105 ntBASIC13.71□□□□□ -0.21
VPS25Q9BRG1 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
VPS25Q9BRG1 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
VPS25Q9BRG1 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC13.71□□□□□ -0.21
VPS25Q9BRG1 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
VPS25Q9BRG1 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
VPS25Q9BRG1 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
VPS25Q9BRG1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC13.71□□□□□ -0.22
VPS25Q9BRG1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
VPS25Q9BRG1 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
VPS25Q9BRG1 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
VPS25Q9BRG1 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VPS25Q9BRG1 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VPS25Q9BRG1 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC13.7□□□□□ -0.22
VPS25Q9BRG1 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.7□□□□□ -0.22
VPS25Q9BRG1 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
VPS25Q9BRG1 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VPS25Q9BRG1 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VPS25Q9BRG1 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
VPS25Q9BRG1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VPS25Q9BRG1 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VPS25Q9BRG1 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
VPS25Q9BRG1 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VPS25Q9BRG1 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC13.7□□□□□ -0.22
VPS25Q9BRG1 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VPS25Q9BRG1 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
VPS25Q9BRG1 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
VPS25Q9BRG1 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
VPS25Q9BRG1 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
VPS25Q9BRG1 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
VPS25Q9BRG1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VPS25Q9BRG1 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VPS25Q9BRG1 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VPS25Q9BRG1 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VPS25Q9BRG1 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
VPS25Q9BRG1 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
VPS25Q9BRG1 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VPS25Q9BRG1 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC13.7□□□□□ -0.22
VPS25Q9BRG1 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC13.7□□□□□ -0.22
VPS25Q9BRG1 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.7□□□□□ -0.22
VPS25Q9BRG1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VPS25Q9BRG1 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.7□□□□□ -0.22
VPS25Q9BRG1 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
VPS25Q9BRG1 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
VPS25Q9BRG1 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
VPS25Q9BRG1 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms