RNA–Protein interactions for RNA: ENST00000224721.10

CDH23-201, Transcript of cadherin related 23, humanhuman

APPRIS P5 TSL 5 BASIC

Gene CDH23, Length 11,139 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-201ENST00000224721 PELP1Q8IZL8 1130 aaKnown RBP23.72■■□□□ 1.39
CDH23-201ENST00000224721 DCAF8L2P0C7V8 631 aa23.55■■□□□ 1.36
CDH23-201ENST00000224721 SUPT5HO00267 1087 aaKnown RBP22.82■■□□□ 1.24
CDH23-201ENST00000224721 MYT1Q01538 1121 aa22.72■■□□□ 1.23
CDH23-201ENST00000224721 ERICH6Q7L0X2 663 aa22.7■■□□□ 1.22
CDH23-201ENST00000224721 CCER1Q8TC90 406 aaPredicted RBP22.51■■□□□ 1.19
CDH23-201ENST00000224721 EHMT2Q96KQ7 1210 aa22.47■■□□□ 1.19
CDH23-201ENST00000224721 CENPBP07199 599 aaPredicted RBP22.44■■□□□ 1.18
CDH23-201ENST00000224721 SHROOM4Q9ULL8 1493 aa22.26■■□□□ 1.15
CDH23-201ENST00000224721 APLP2Q06481 763 aa22.26■■□□□ 1.15
CDH23-201ENST00000224721 PCGF6Q9BYE7 350 aa22.16■■□□□ 1.14
CDH23-201ENST00000224721 ZEB1P37275 1124 aaPredicted RBP22.01■■□□□ 1.11
CDH23-201ENST00000224721 NEFLP07196 543 aa21.99■■□□□ 1.11
CDH23-201ENST00000224721 TTBK1Q5TCY1 1321 aaPredicted RBP21.92■■□□□ 1.1
CDH23-201ENST00000224721 YTHDC1Q96MU7 727 aaKnown RBP21.78■■□□□ 1.08
CDH23-201ENST00000224721 NISCHQ9Y2I1 1504 aa21.75■■□□□ 1.07
CDH23-201ENST00000224721 FAM9AQ8IZU1 332 aaPredicted RBP21.61■■□□□ 1.05
CDH23-201ENST00000224721 DAXXQ9UER7 740 aaPredicted RBP21.57■■□□□ 1.04
CDH23-201ENST00000224721 RANGAP1P46060 587 aaPredicted RBP21.31■■□□□ 1
CDH23-201ENST00000224721 RTL5Q5HYW3 569 aaPredicted RBP21.19■□□□□ 0.98
CDH23-201ENST00000224721 ATP1B4Q9UN42 357 aaPredicted RBP21.13■□□□□ 0.97
CDH23-201ENST00000224721 TRIM41Q8WV44 630 aa21.09■□□□□ 0.97
CDH23-201ENST00000224721 ZNF316A6NFI3 1004 aaPredicted RBP21.07■□□□□ 0.96
CDH23-201ENST00000224721 UBTFP17480 764 aaKnown RBP21.04■□□□□ 0.96
CDH23-201ENST00000224721 HRCP23327 699 aa21.02■□□□□ 0.96
CDH23-201ENST00000224721 TRIM26Q12899 539 aaPredicted RBP20.94■□□□□ 0.94
CDH23-201ENST00000224721 PPARGC1BQ86YN6 1023 aaKnown RBP20.84■□□□□ 0.93
CDH23-201ENST00000224721 POLR3GLQ9BT43 218 aa20.79■□□□□ 0.92
CDH23-201ENST00000224721 CLSPNQ9HAW4 1339 aa20.74■□□□□ 0.91
CDH23-201ENST00000224721 DIEXFQ68CQ4 756 aaKnown RBP20.61■□□□□ 0.89
CDH23-201ENST00000224721 CNGB1Q14028 1251 aaPredicted RBP20.56■□□□□ 0.88
CDH23-201ENST00000224721 ITGAEP38570 1179 aa20.52■□□□□ 0.88
CDH23-201ENST00000224721 GTF3C3Q9Y5Q9 886 aa20.45■□□□□ 0.86
CDH23-201ENST00000224721 BCANQ96GW7 911 aa20.44■□□□□ 0.86
CDH23-201ENST00000224721 CDK11AQ9UQ88 783 aaPredicted RBP20.43■□□□□ 0.86
CDH23-201ENST00000224721 HNRNPUL2Q1KMD3 747 aaKnown RBP20.4■□□□□ 0.86
CDH23-201ENST00000224721 SLC4A1APQ9BWU0 796 aaKnown RBP20.35■□□□□ 0.85
CDH23-201ENST00000224721 EIF5BO60841 1220 aaKnown RBP20.33■□□□□ 0.85
CDH23-201ENST00000224721 GLIPR1L2Q4G1C9 344 aa20.31■□□□□ 0.84
CDH23-201ENST00000224721 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.3■□□□□ 0.84
CDH23-201ENST00000224721 MYT1LQ9UL68 1186 aa20.26■□□□□ 0.83
CDH23-201ENST00000224721 ANP32AP39687 249 aaKnown RBP20.25■□□□□ 0.83
CDH23-201ENST00000224721 ZBTB47Q9UFB7 747 aaPredicted RBP20.18■□□□□ 0.82
CDH23-201ENST00000224721 LOC105371045A0A1W2PR82 267 aa20.16■□□□□ 0.82
CDH23-201ENST00000224721 ANP32CO43423 234 aa20.11■□□□□ 0.81
CDH23-201ENST00000224721 CHIC1Q5VXU3 224 aa20.11■□□□□ 0.81
CDH23-201ENST00000224721 ANP32BQ92688 251 aaKnown RBP20.11■□□□□ 0.81
CDH23-201ENST00000224721 CANXP27824 592 aaKnown RBP20.07■□□□□ 0.8
CDH23-201ENST00000224721 ACIN1Q9UKV3 1341 aaKnown RBP20.03■□□□□ 0.8
CDH23-201ENST00000224721 NPM2Q86SE8 214 aaKnown RBP19.99■□□□□ 0.79
CDH23-201ENST00000224721 BCL11AQ9H165 835 aa19.96■□□□□ 0.79
CDH23-201ENST00000224721 NEUROD1Q13562 356 aa19.94■□□□□ 0.78
CDH23-201ENST00000224721 FAM50AQ14320 339 aaKnown RBP19.93■□□□□ 0.78
CDH23-201ENST00000224721 HSP90AA1P07900 732 aaKnown RBP19.88■□□□□ 0.77
CDH23-201ENST00000224721 NBR1Q14596 966 aa19.82■□□□□ 0.76
CDH23-201ENST00000224721 TRIM52Q96A61 297 aa19.81■□□□□ 0.76
CDH23-201ENST00000224721 ZNF326Q5BKZ1 582 aaKnown RBP19.81■□□□□ 0.76
CDH23-201ENST00000224721 UPF2Q9HAU5 1272 aaKnown RBP19.73■□□□□ 0.75
CDH23-201ENST00000224721 SLC24A1O60721 1099 aa19.72■□□□□ 0.75
CDH23-201ENST00000224721 FKBP8Q14318 412 aa19.68■□□□□ 0.74
CDH23-201ENST00000224721 ARXQ96QS3 562 aa19.67■□□□□ 0.74
CDH23-201ENST00000224721 NEFMP07197 916 aa19.66■□□□□ 0.74
CDH23-201ENST00000224721 TNNT2P45379 298 aaPredicted RBP19.56■□□□□ 0.72
CDH23-201ENST00000224721 CCDC136Q96JN2 1154 aa19.46■□□□□ 0.71
CDH23-201ENST00000224721 HNRNPUQ00839 825 aaKnown RBP eCLIP19.43■□□□□ 0.7
CDH23-201ENST00000224721 SCAF1Q9H7N4 1312 aaKnown RBP19.4■□□□□ 0.7
CDH23-201ENST00000224721 TRIM44Q96DX7 344 aaPredicted RBP19.37■□□□□ 0.69
CDH23-201ENST00000224721 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.36■□□□□ 0.69
CDH23-201ENST00000224721 CDK11BP21127 795 aaKnown RBP19.31■□□□□ 0.68
CDH23-201ENST00000224721 TONSLQ96HA7 1378 aa19.3■□□□□ 0.68
CDH23-201ENST00000224721 DDRGK1Q96HY6 314 aa19.3■□□□□ 0.68
CDH23-201ENST00000224721 BECN1Q14457 450 aa19.3■□□□□ 0.68
CDH23-201ENST00000224721 FAM9BQ8IZU0 186 aa19.29■□□□□ 0.68
CDH23-201ENST00000224721 ANP32EQ9BTT0 268 aa19.28■□□□□ 0.68
CDH23-201ENST00000224721 NAP1L5Q96NT1 182 aaPredicted RBP19.25■□□□□ 0.67
CDH23-201ENST00000224721 DCAF1Q9Y4B6 1507 aa19.24■□□□□ 0.67
CDH23-201ENST00000224721 ERICH6BQ5W0A0 696 aa19.22■□□□□ 0.67
CDH23-201ENST00000224721 PTMAP06454 111 aaKnown RBP19.21■□□□□ 0.67
CDH23-201ENST00000224721 CCDC180Q9P1Z9 1646 aa19.19■□□□□ 0.66
CDH23-201ENST00000224721 GOLGA6L22H0YM25 854 aa19.19■□□□□ 0.66
CDH23-201ENST00000224721 MYH16Q9H6N6 1097 aa19.18■□□□□ 0.66
CDH23-201ENST00000224721 DDX10Q13206 875 aaKnown RBP19.18■□□□□ 0.66
CDH23-201ENST00000224721 IRX6P78412 446 aaPredicted RBP19.17■□□□□ 0.66
CDH23-201ENST00000224721 NCLP19338 710 aaKnown RBP19.17■□□□□ 0.66
CDH23-201ENST00000224721 DNTTIP2Q5QJE6 756 aaKnown RBP19.15■□□□□ 0.66
CDH23-201ENST00000224721 RTN4Q9NQC3 1192 aaKnown RBP19.15■□□□□ 0.66
CDH23-201ENST00000224721 SALL2Q9Y467 1007 aaPredicted RBP19.15■□□□□ 0.66
CDH23-201ENST00000224721 TMC1Q8TDI8 760 aa19.13■□□□□ 0.65
CDH23-201ENST00000224721 MRS2Q9HD23 443 aa19.06■□□□□ 0.64
CDH23-201ENST00000224721 WDR43Q15061 677 aaKnown RBP eCLIP19.06■□□□□ 0.64
CDH23-201ENST00000224721 ZRSR1Q15695 479 aaKnown RBP19.03■□□□□ 0.64
CDH23-201ENST00000224721 MIER1Q8N108 512 aa19■□□□□ 0.63
CDH23-201ENST00000224721 LAS1LQ9Y4W2 734 aaKnown RBP18.99■□□□□ 0.63
CDH23-201ENST00000224721 PPM1GO15355 546 aaPredicted RBP18.98■□□□□ 0.63
CDH23-201ENST00000224721 NOP58Q9Y2X3 529 aaKnown RBP18.97■□□□□ 0.63
CDH23-201ENST00000224721 ARID3CA6NKF2 412 aa18.96■□□□□ 0.63
CDH23-201ENST00000224721 ZNF777Q9ULD5 760 aaPredicted RBP18.94■□□□□ 0.62
CDH23-201ENST00000224721 CHAF1AQ13111 956 aaPredicted RBP18.92■□□□□ 0.62
CDH23-201ENST00000224721 AMER1Q5JTC6 1135 aaPredicted RBP18.92■□□□□ 0.62
CDH23-201ENST00000224721 CASC1Q6TDU7 716 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms