RNA–Protein interactions for RNA: ENST00000297469.3

GPER1-201, Transcript of G protein-coupled estrogen receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPER1, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPER1-201ENST00000297469 NISCHQ9Y2I1 1504 aa31.35■■■□□ 2.61
GPER1-201ENST00000297469 SHROOM4Q9ULL8 1493 aa26.89■■□□□ 1.9
GPER1-201ENST00000297469 CCDC180Q9P1Z9 1646 aa26.66■■□□□ 1.86
GPER1-201ENST00000297469 DCAF8L2P0C7V8 631 aa26.66■■□□□ 1.86
GPER1-201ENST00000297469 PELP1Q8IZL8 1130 aaKnown RBP26.58■■□□□ 1.85
GPER1-201ENST00000297469 ZCCHC6Q5VYS8 1495 aaKnown RBP26.39■■□□□ 1.82
GPER1-201ENST00000297469 SUPT5HO00267 1087 aaKnown RBP26.3■■□□□ 1.8
GPER1-201ENST00000297469 MYT1Q01538 1121 aa26.04■■□□□ 1.76
GPER1-201ENST00000297469 MYO15BQ96JP2 1530 aa25.66■■□□□ 1.7
GPER1-201ENST00000297469 CHIC1Q5VXU3 224 aa25.65■■□□□ 1.7
GPER1-201ENST00000297469 DCAF1Q9Y4B6 1507 aa25.51■■□□□ 1.67
GPER1-201ENST00000297469 ABCC9O60706 1549 aa25.45■■□□□ 1.67
GPER1-201ENST00000297469 HRCP23327 699 aa25.33■■□□□ 1.65
GPER1-201ENST00000297469 SCRIBQ14160 1630 aa25.25■■□□□ 1.63
GPER1-201ENST00000297469 PCGF6Q9BYE7 350 aa25.18■■□□□ 1.62
GPER1-201ENST00000297469 LOC105371045A0A1W2PR82 267 aa24.95■■□□□ 1.59
GPER1-201ENST00000297469 TTBK1Q5TCY1 1321 aaPredicted RBP24.94■■□□□ 1.58
GPER1-201ENST00000297469 PPARGC1BQ86YN6 1023 aaKnown RBP24.82■■□□□ 1.56
GPER1-201ENST00000297469 NACADO15069 1562 aa24.82■■□□□ 1.56
GPER1-201ENST00000297469 RSF1Q96T23 1441 aaPredicted RBP24.72■■□□□ 1.55
GPER1-201ENST00000297469 CECR2Q9BXF3 1484 aa24.63■■□□□ 1.53
GPER1-201ENST00000297469 SCAF1Q9H7N4 1312 aaKnown RBP24.6■■□□□ 1.53
GPER1-201ENST00000297469 TRIM26Q12899 539 aaPredicted RBP24.59■■□□□ 1.53
GPER1-201ENST00000297469 RB1CC1Q8TDY2 1594 aa24.56■■□□□ 1.52
GPER1-201ENST00000297469 PRKCSHP14314 528 aaPredicted RBP24.54■■□□□ 1.52
GPER1-201ENST00000297469 MROH2BQ7Z745 1585 aa24.44■■□□□ 1.5
GPER1-201ENST00000297469 TRIM41Q8WV44 630 aa24.44■■□□□ 1.5
GPER1-201ENST00000297469 PABPN1Q86U42 306 aaKnown RBP eCLIP24.39■■□□□ 1.49
GPER1-201ENST00000297469 FAM9AQ8IZU1 332 aaPredicted RBP24.32■■□□□ 1.48
GPER1-201ENST00000297469 WIZO95785 1651 aa24.31■■□□□ 1.48
GPER1-201ENST00000297469 EHMT2Q96KQ7 1210 aa24.28■■□□□ 1.48
GPER1-201ENST00000297469 UNC13AQ9UPW8 1703 aa24.2■■□□□ 1.47
GPER1-201ENST00000297469 BCL11AQ9H165 835 aa24.18■■□□□ 1.46
GPER1-201ENST00000297469 ZEB1P37275 1124 aaPredicted RBP24.14■■□□□ 1.45
GPER1-201ENST00000297469 BAZ1AQ9NRL2 1556 aaPredicted RBP24.09■■□□□ 1.45
GPER1-201ENST00000297469 SMARCA4P51532 1647 aa23.95■■□□□ 1.42
GPER1-201ENST00000297469 BICRAQ9NZM4 1560 aa23.91■■□□□ 1.42
GPER1-201ENST00000297469 ERICH6Q7L0X2 663 aa23.9■■□□□ 1.42
GPER1-201ENST00000297469 CCDC88BA6NC98 1476 aa23.8■■□□□ 1.4
GPER1-201ENST00000297469 APLP2Q06481 763 aa23.8■■□□□ 1.4
GPER1-201ENST00000297469 TOP2AP11388 1531 aaKnown RBP23.79■■□□□ 1.4
GPER1-201ENST00000297469 EIF4G1Q04637 1599 aaKnown RBP23.76■■□□□ 1.39
GPER1-201ENST00000297469 ABCC8Q09428 1581 aa23.71■■□□□ 1.39
GPER1-201ENST00000297469 SMARCA2P51531 1590 aa23.69■■□□□ 1.38
GPER1-201ENST00000297469 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.61■■□□□ 1.37
GPER1-201ENST00000297469 CENPBP07199 599 aaPredicted RBP23.55■■□□□ 1.36
GPER1-201ENST00000297469 CCER1Q8TC90 406 aaPredicted RBP23.55■■□□□ 1.36
GPER1-201ENST00000297469 ACIN1Q9UKV3 1341 aaKnown RBP23.49■■□□□ 1.35
GPER1-201ENST00000297469 ATAD2BQ9ULI0 1458 aa23.48■■□□□ 1.35
GPER1-201ENST00000297469 BAZ1BQ9UIG0 1483 aaKnown RBP23.44■■□□□ 1.34
GPER1-201ENST00000297469 WRNQ14191 1432 aaPredicted RBP eCLIP23.43■■□□□ 1.34
GPER1-201ENST00000297469 CEP162Q5TB80 1403 aa23.43■■□□□ 1.34
GPER1-201ENST00000297469 SOGA1O94964 1423 aa23.41■■□□□ 1.34
GPER1-201ENST00000297469 GTF3C3Q9Y5Q9 886 aa23.4■■□□□ 1.34
GPER1-201ENST00000297469 PEG3Q9GZU2 1588 aa23.35■■□□□ 1.33
GPER1-201ENST00000297469 NEUROD1Q13562 356 aa23.35■■□□□ 1.33
GPER1-201ENST00000297469 TNIKQ9UKE5 1360 aa23.33■■□□□ 1.33
GPER1-201ENST00000297469 RUSC2Q8N2Y8 1516 aa23.33■■□□□ 1.33
GPER1-201ENST00000297469 CSRNP3Q8WYN3 585 aa23.28■■□□□ 1.32
GPER1-201ENST00000297469 UBTFP17480 764 aaKnown RBP23.28■■□□□ 1.32
GPER1-201ENST00000297469 EEA1Q15075 1411 aa23.27■■□□□ 1.32
GPER1-201ENST00000297469 SLC24A1O60721 1099 aa23.24■■□□□ 1.31
GPER1-201ENST00000297469 DIEXFQ68CQ4 756 aaKnown RBP23.23■■□□□ 1.31
GPER1-201ENST00000297469 GOLGA3Q08378 1498 aa23.17■■□□□ 1.3
GPER1-201ENST00000297469 RANGAP1P46060 587 aaPredicted RBP23.16■■□□□ 1.3
GPER1-201ENST00000297469 SYNJ1O43426 1573 aa23.15■■□□□ 1.3
GPER1-201ENST00000297469 ANP32EQ9BTT0 268 aa23.07■■□□□ 1.28
GPER1-201ENST00000297469 NCAPD3P42695 1498 aa23.01■■□□□ 1.27
GPER1-201ENST00000297469 CEP164Q9UPV0 1460 aa23■■□□□ 1.27
GPER1-201ENST00000297469 ZNF316A6NFI3 1004 aaPredicted RBP22.96■■□□□ 1.27
GPER1-201ENST00000297469 KIF21BO75037 1637 aa22.96■■□□□ 1.27
GPER1-201ENST00000297469 CLIP1P30622 1438 aa22.94■■□□□ 1.26
GPER1-201ENST00000297469 HNRNPUL2Q1KMD3 747 aaKnown RBP22.93■■□□□ 1.26
GPER1-201ENST00000297469 HMGXB3Q12766 1538 aa22.92■■□□□ 1.26
GPER1-201ENST00000297469 VPS8Q8N3P4 1428 aa22.86■■□□□ 1.25
GPER1-201ENST00000297469 RAPGEF2Q9Y4G8 1499 aa22.82■■□□□ 1.24
GPER1-201ENST00000297469 TOP2BQ02880 1626 aa22.8■■□□□ 1.24
GPER1-201ENST00000297469 CC2D2AQ9P2K1 1620 aa22.76■■□□□ 1.23
GPER1-201ENST00000297469 CUX1P39880 1505 aa22.75■■□□□ 1.23
GPER1-201ENST00000297469 YTHDC1Q96MU7 727 aaKnown RBP22.75■■□□□ 1.23
GPER1-201ENST00000297469 CFTRP13569 1480 aa22.75■■□□□ 1.23
GPER1-201ENST00000297469 MIER1Q8N108 512 aa22.7■■□□□ 1.22
GPER1-201ENST00000297469 BIVM-ERCC5R4GMW8 1640 aa22.67■■□□□ 1.22
GPER1-201ENST00000297469 CADPSQ9ULU8 1353 aa22.65■■□□□ 1.22
GPER1-201ENST00000297469 DNAJC5BQ9UF47 199 aa22.59■■□□□ 1.21
GPER1-201ENST00000297469 KIF27Q86VH2 1401 aa22.57■■□□□ 1.2
GPER1-201ENST00000297469 ERICH3Q5RHP9 1530 aa22.54■■□□□ 1.2
GPER1-201ENST00000297469 NESP48681 1621 aa22.53■■□□□ 1.2
GPER1-201ENST00000297469 PRXQ9BXM0 1461 aa22.53■■□□□ 1.2
GPER1-201ENST00000297469 ARAP1Q96P48 1450 aa22.52■■□□□ 1.2
GPER1-201ENST00000297469 CUX2O14529 1486 aa22.52■■□□□ 1.19
GPER1-201ENST00000297469 ANO8Q9HCE9 1232 aaPredicted RBP22.5■■□□□ 1.19
GPER1-201ENST00000297469 EIF5BO60841 1220 aaKnown RBP22.5■■□□□ 1.19
GPER1-201ENST00000297469 DHX57Q6P158 1386 aaKnown RBP22.47■■□□□ 1.19
GPER1-201ENST00000297469 KANK4Q5T7N3 995 aaPredicted RBP22.47■■□□□ 1.19
GPER1-201ENST00000297469 FANCD2Q9BXW9 1451 aa22.46■■□□□ 1.19
GPER1-201ENST00000297469 FGD5Q6ZNL6 1462 aa22.45■■□□□ 1.18
GPER1-201ENST00000297469 DAXXQ9UER7 740 aaPredicted RBP22.45■■□□□ 1.18
GPER1-201ENST00000297469 CLSPNQ9HAW4 1339 aa22.45■■□□□ 1.18
GPER1-201ENST00000297469 PRDM2Q13029 1718 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms