Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SFTPBP07988 AC016405.3-201ENST00000607710 860 ntBASIC17.13■□□□□ 0.33
SFTPBP07988 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
SFTPBP07988 AL356652.1-201ENST00000615962 565 ntBASIC17.13■□□□□ 0.33
SFTPBP07988 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
SFTPBP07988 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SFTPBP07988 AC120498.9-201ENST00000339021 3867 ntBASIC17.13■□□□□ 0.33
SFTPBP07988 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
SFTPBP07988 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.13■□□□□ 0.33
SFTPBP07988 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SFTPBP07988 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SFTPBP07988 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.13■□□□□ 0.33
SFTPBP07988 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SFTPBP07988 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.13■□□□□ 0.33
SFTPBP07988 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SFTPBP07988 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SFTPBP07988 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SFTPBP07988 AC087633.2-202ENST00000565166 1439 ntBASIC17.13■□□□□ 0.33
SFTPBP07988 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SFTPBP07988 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SFTPBP07988 CYP21A1P-202ENST00000354927 1481 ntBASIC17.12■□□□□ 0.33
SFTPBP07988 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SFTPBP07988 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SFTPBP07988 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SFTPBP07988 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SFTPBP07988 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SFTPBP07988 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.12■□□□□ 0.33
SFTPBP07988 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SFTPBP07988 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
SFTPBP07988 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SFTPBP07988 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SFTPBP07988 AC007322.4-201ENST00000509611 723 ntBASIC17.12■□□□□ 0.33
SFTPBP07988 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.12■□□□□ 0.33
SFTPBP07988 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.12■□□□□ 0.33
SFTPBP07988 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SFTPBP07988 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SFTPBP07988 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SFTPBP07988 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SFTPBP07988 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.12■□□□□ 0.33
SFTPBP07988 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SFTPBP07988 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SFTPBP07988 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SFTPBP07988 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SFTPBP07988 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.12■□□□□ 0.33
SFTPBP07988 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.11■□□□□ 0.33
SFTPBP07988 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SFTPBP07988 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SFTPBP07988 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SFTPBP07988 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
SFTPBP07988 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.11■□□□□ 0.33
SFTPBP07988 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SFTPBP07988 AL691432.2-201ENST00000607222 2038 ntBASIC17.11■□□□□ 0.33
SFTPBP07988 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SFTPBP07988 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SFTPBP07988 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SFTPBP07988 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SFTPBP07988 PGM5P4-201ENST00000421970 445 ntBASIC17.11■□□□□ 0.33
SFTPBP07988 TSPY6P-201ENST00000448518 926 ntBASIC17.11■□□□□ 0.33
SFTPBP07988 AF201337.1-201ENST00000520239 748 ntBASIC17.11■□□□□ 0.33
SFTPBP07988 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SFTPBP07988 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.11■□□□□ 0.33
SFTPBP07988 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.11■□□□□ 0.33
SFTPBP07988 AL162412.1-201ENST00000567129 965 ntBASIC17.11■□□□□ 0.33
SFTPBP07988 AC105036.2-201ENST00000569468 176 ntBASIC17.11■□□□□ 0.33
SFTPBP07988 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.11■□□□□ 0.33
SFTPBP07988 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.11■□□□□ 0.33
SFTPBP07988 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.11■□□□□ 0.33
SFTPBP07988 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC17.11■□□□□ 0.33
SFTPBP07988 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SFTPBP07988 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SFTPBP07988 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SFTPBP07988 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.11■□□□□ 0.33
SFTPBP07988 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.11■□□□□ 0.33
SFTPBP07988 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
SFTPBP07988 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SFTPBP07988 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.1■□□□□ 0.33
SFTPBP07988 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SFTPBP07988 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SFTPBP07988 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SFTPBP07988 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SFTPBP07988 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
SFTPBP07988 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SFTPBP07988 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SFTPBP07988 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.1■□□□□ 0.33
SFTPBP07988 GUSBP6-202ENST00000438529 1198 ntBASIC17.1■□□□□ 0.33
SFTPBP07988 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.1■□□□□ 0.33
SFTPBP07988 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.1■□□□□ 0.33
SFTPBP07988 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SFTPBP07988 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SFTPBP07988 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SFTPBP07988 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.1■□□□□ 0.33
SFTPBP07988 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.1■□□□□ 0.33
SFTPBP07988 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SFTPBP07988 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SFTPBP07988 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.1■□□□□ 0.33
SFTPBP07988 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
SFTPBP07988 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SFTPBP07988 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SFTPBP07988 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.09■□□□□ 0.33
SFTPBP07988 AC125437.2-201ENST00000625180 2167 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms