Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM56-RWDD3S4R434 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM56-RWDD3S4R434 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM56-RWDD3S4R434 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
TMEM56-RWDD3S4R434 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM56-RWDD3S4R434 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM56-RWDD3S4R434 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM56-RWDD3S4R434 AC008406.3-201ENST00000620001 1374 ntBASIC16.18■□□□□ 0.18
TMEM56-RWDD3S4R434 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM56-RWDD3S4R434 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
TMEM56-RWDD3S4R434 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.18■□□□□ 0.18
TMEM56-RWDD3S4R434 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.18■□□□□ 0.18
TMEM56-RWDD3S4R434 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.18■□□□□ 0.18
TMEM56-RWDD3S4R434 AC110285.6-201ENST00000617652 491 ntBASIC16.18■□□□□ 0.18
TMEM56-RWDD3S4R434 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TMEM56-RWDD3S4R434 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM56-RWDD3S4R434 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM56-RWDD3S4R434 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM56-RWDD3S4R434 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM56-RWDD3S4R434 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.18■□□□□ 0.18
TMEM56-RWDD3S4R434 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM56-RWDD3S4R434 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.18■□□□□ 0.18
TMEM56-RWDD3S4R434 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM56-RWDD3S4R434 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM56-RWDD3S4R434 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM56-RWDD3S4R434 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEM56-RWDD3S4R434 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM56-RWDD3S4R434 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.17■□□□□ 0.18
TMEM56-RWDD3S4R434 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM56-RWDD3S4R434 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
TMEM56-RWDD3S4R434 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM56-RWDD3S4R434 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.17■□□□□ 0.18
TMEM56-RWDD3S4R434 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM56-RWDD3S4R434 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM56-RWDD3S4R434 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM56-RWDD3S4R434 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC16.17■□□□□ 0.18
TMEM56-RWDD3S4R434 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.17■□□□□ 0.18
TMEM56-RWDD3S4R434 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.17■□□□□ 0.18
TMEM56-RWDD3S4R434 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC16.17■□□□□ 0.18
TMEM56-RWDD3S4R434 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM56-RWDD3S4R434 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
TMEM56-RWDD3S4R434 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM56-RWDD3S4R434 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM56-RWDD3S4R434 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM56-RWDD3S4R434 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM56-RWDD3S4R434 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM56-RWDD3S4R434 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM56-RWDD3S4R434 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM56-RWDD3S4R434 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM56-RWDD3S4R434 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TMEM56-RWDD3S4R434 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.16■□□□□ 0.18
TMEM56-RWDD3S4R434 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM56-RWDD3S4R434 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM56-RWDD3S4R434 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM56-RWDD3S4R434 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM56-RWDD3S4R434 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM56-RWDD3S4R434 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.16■□□□□ 0.18
TMEM56-RWDD3S4R434 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM56-RWDD3S4R434 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.16■□□□□ 0.18
TMEM56-RWDD3S4R434 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.16■□□□□ 0.18
TMEM56-RWDD3S4R434 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM56-RWDD3S4R434 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM56-RWDD3S4R434 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.16■□□□□ 0.18
TMEM56-RWDD3S4R434 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.16■□□□□ 0.18
TMEM56-RWDD3S4R434 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TMEM56-RWDD3S4R434 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM56-RWDD3S4R434 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM56-RWDD3S4R434 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM56-RWDD3S4R434 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM56-RWDD3S4R434 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM56-RWDD3S4R434 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM56-RWDD3S4R434 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM56-RWDD3S4R434 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM56-RWDD3S4R434 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM56-RWDD3S4R434 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.16■□□□□ 0.18
TMEM56-RWDD3S4R434 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM56-RWDD3S4R434 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
TMEM56-RWDD3S4R434 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM56-RWDD3S4R434 CYP21A1P-202ENST00000354927 1481 ntBASIC16.16■□□□□ 0.18
TMEM56-RWDD3S4R434 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM56-RWDD3S4R434 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM56-RWDD3S4R434 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TMEM56-RWDD3S4R434 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM56-RWDD3S4R434 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TMEM56-RWDD3S4R434 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM56-RWDD3S4R434 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM56-RWDD3S4R434 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM56-RWDD3S4R434 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.15■□□□□ 0.18
TMEM56-RWDD3S4R434 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC16.15■□□□□ 0.18
TMEM56-RWDD3S4R434 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM56-RWDD3S4R434 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM56-RWDD3S4R434 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM56-RWDD3S4R434 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
TMEM56-RWDD3S4R434 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM56-RWDD3S4R434 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
TMEM56-RWDD3S4R434 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM56-RWDD3S4R434 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.15■□□□□ 0.18
TMEM56-RWDD3S4R434 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.15■□□□□ 0.18
TMEM56-RWDD3S4R434 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.15■□□□□ 0.18
TMEM56-RWDD3S4R434 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms