Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC23.65■■□□□ 1.38
PCDHAC2Q9Y5I4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PCDHAC2Q9Y5I4 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
PCDHAC2Q9Y5I4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
PCDHAC2Q9Y5I4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC23.64■■□□□ 1.38
PCDHAC2Q9Y5I4 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC23.64■■□□□ 1.38
PCDHAC2Q9Y5I4 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.64■■□□□ 1.37
PCDHAC2Q9Y5I4 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHAC2Q9Y5I4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHAC2Q9Y5I4 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHAC2Q9Y5I4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC23.64■■□□□ 1.37
PCDHAC2Q9Y5I4 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC23.64■■□□□ 1.37
PCDHAC2Q9Y5I4 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PCDHAC2Q9Y5I4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
PCDHAC2Q9Y5I4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC23.64■■□□□ 1.37
PCDHAC2Q9Y5I4 SMG8-203ENST00000578922 2178 ntBASIC23.64■■□□□ 1.37
PCDHAC2Q9Y5I4 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC23.64■■□□□ 1.37
PCDHAC2Q9Y5I4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC23.63■■□□□ 1.37
PCDHAC2Q9Y5I4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC23.63■■□□□ 1.37
PCDHAC2Q9Y5I4 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC23.63■■□□□ 1.37
PCDHAC2Q9Y5I4 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC23.63■■□□□ 1.37
PCDHAC2Q9Y5I4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC23.63■■□□□ 1.37
PCDHAC2Q9Y5I4 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHAC2Q9Y5I4 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHAC2Q9Y5I4 CRYGFP-201ENST00000418459 633 ntBASIC23.63■■□□□ 1.37
PCDHAC2Q9Y5I4 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC23.63■■□□□ 1.37
PCDHAC2Q9Y5I4 RMI2-205ENST00000576027 818 ntTSL 2 BASIC23.63■■□□□ 1.37
PCDHAC2Q9Y5I4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC23.63■■□□□ 1.37
PCDHAC2Q9Y5I4 GOLGA6L3-201ENST00000507199 1679 ntBASIC23.63■■□□□ 1.37
PCDHAC2Q9Y5I4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHAC2Q9Y5I4 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHAC2Q9Y5I4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
PCDHAC2Q9Y5I4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHAC2Q9Y5I4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PCDHAC2Q9Y5I4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHAC2Q9Y5I4 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHAC2Q9Y5I4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC23.62■■□□□ 1.37
PCDHAC2Q9Y5I4 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
PCDHAC2Q9Y5I4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
PCDHAC2Q9Y5I4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHAC2Q9Y5I4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC23.62■■□□□ 1.37
PCDHAC2Q9Y5I4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHAC2Q9Y5I4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC23.62■■□□□ 1.37
PCDHAC2Q9Y5I4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHAC2Q9Y5I4 AC097488.1-201ENST00000507834 756 ntBASIC23.62■■□□□ 1.37
PCDHAC2Q9Y5I4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC23.62■■□□□ 1.37
PCDHAC2Q9Y5I4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC23.62■■□□□ 1.37
PCDHAC2Q9Y5I4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDHAC2Q9Y5I4 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC23.62■■□□□ 1.37
PCDHAC2Q9Y5I4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
PCDHAC2Q9Y5I4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHAC2Q9Y5I4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHAC2Q9Y5I4 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHAC2Q9Y5I4 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHAC2Q9Y5I4 YBX1P10-201ENST00000444752 975 ntBASIC23.61■■□□□ 1.37
PCDHAC2Q9Y5I4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC23.61■■□□□ 1.37
PCDHAC2Q9Y5I4 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDHAC2Q9Y5I4 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC23.61■■□□□ 1.37
PCDHAC2Q9Y5I4 AC026271.3-201ENST00000571884 352 ntBASIC23.61■■□□□ 1.37
PCDHAC2Q9Y5I4 AP005242.2-201ENST00000580065 1175 ntBASIC23.61■■□□□ 1.37
PCDHAC2Q9Y5I4 FAM87A-204ENST00000613235 858 ntBASIC23.61■■□□□ 1.37
PCDHAC2Q9Y5I4 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC23.61■■□□□ 1.37
PCDHAC2Q9Y5I4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
PCDHAC2Q9Y5I4 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHAC2Q9Y5I4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHAC2Q9Y5I4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC23.6■■□□□ 1.37
PCDHAC2Q9Y5I4 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHAC2Q9Y5I4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHAC2Q9Y5I4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHAC2Q9Y5I4 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHAC2Q9Y5I4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHAC2Q9Y5I4 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHAC2Q9Y5I4 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC23.6■■□□□ 1.37
PCDHAC2Q9Y5I4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC23.6■■□□□ 1.37
PCDHAC2Q9Y5I4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC23.6■■□□□ 1.37
PCDHAC2Q9Y5I4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.6■■□□□ 1.37
PCDHAC2Q9Y5I4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.6■■□□□ 1.37
PCDHAC2Q9Y5I4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC23.6■■□□□ 1.37
PCDHAC2Q9Y5I4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHAC2Q9Y5I4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDHAC2Q9Y5I4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC23.59■■□□□ 1.37
PCDHAC2Q9Y5I4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHAC2Q9Y5I4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHAC2Q9Y5I4 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHAC2Q9Y5I4 TSPY14P-201ENST00000303979 915 ntBASIC23.59■■□□□ 1.37
PCDHAC2Q9Y5I4 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHAC2Q9Y5I4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC23.59■■□□□ 1.37
PCDHAC2Q9Y5I4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC23.59■■□□□ 1.37
PCDHAC2Q9Y5I4 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC23.59■■□□□ 1.37
PCDHAC2Q9Y5I4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC23.59■■□□□ 1.37
PCDHAC2Q9Y5I4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC23.59■■□□□ 1.37
PCDHAC2Q9Y5I4 HLA-A-209ENST00000638375 975 ntBASIC23.59■■□□□ 1.37
PCDHAC2Q9Y5I4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHAC2Q9Y5I4 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHAC2Q9Y5I4 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHAC2Q9Y5I4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHAC2Q9Y5I4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHAC2Q9Y5I4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHAC2Q9Y5I4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDHAC2Q9Y5I4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms