Protein–RNA interactions for Protein: Q86YN6

PPARGC1B, Peroxisome proliferator-activated receptor gamma coactivator 1-beta, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1BQ86YN6 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC31.28■■■□□ 2.6
PPARGC1BQ86YN6 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC31.28■■■□□ 2.6
PPARGC1BQ86YN6 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
PPARGC1BQ86YN6 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
PPARGC1BQ86YN6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC31.28■■■□□ 2.6
PPARGC1BQ86YN6 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC31.28■■■□□ 2.6
PPARGC1BQ86YN6 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
PPARGC1BQ86YN6 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
PPARGC1BQ86YN6 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC31.27■■■□□ 2.6
PPARGC1BQ86YN6 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
PPARGC1BQ86YN6 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
PPARGC1BQ86YN6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
PPARGC1BQ86YN6 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC31.27■■■□□ 2.6
PPARGC1BQ86YN6 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC31.27■■■□□ 2.6
PPARGC1BQ86YN6 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
PPARGC1BQ86YN6 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC31.27■■■□□ 2.6
PPARGC1BQ86YN6 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
PPARGC1BQ86YN6 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
PPARGC1BQ86YN6 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC31.27■■■□□ 2.6
PPARGC1BQ86YN6 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC31.27■■■□□ 2.6
PPARGC1BQ86YN6 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
PPARGC1BQ86YN6 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC31.27■■■□□ 2.6
PPARGC1BQ86YN6 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
PPARGC1BQ86YN6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.6
PPARGC1BQ86YN6 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC31.26■■■□□ 2.6
PPARGC1BQ86YN6 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC31.26■■■□□ 2.6
PPARGC1BQ86YN6 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC31.26■■■□□ 2.6
PPARGC1BQ86YN6 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC31.26■■■□□ 2.59
PPARGC1BQ86YN6 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
PPARGC1BQ86YN6 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
PPARGC1BQ86YN6 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC31.26■■■□□ 2.59
PPARGC1BQ86YN6 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
PPARGC1BQ86YN6 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
PPARGC1BQ86YN6 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
PPARGC1BQ86YN6 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC31.26■■■□□ 2.59
PPARGC1BQ86YN6 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.59
PPARGC1BQ86YN6 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC31.26■■■□□ 2.59
PPARGC1BQ86YN6 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
PPARGC1BQ86YN6 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.59
PPARGC1BQ86YN6 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
PPARGC1BQ86YN6 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC31.25■■■□□ 2.59
PPARGC1BQ86YN6 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC31.25■■■□□ 2.59
PPARGC1BQ86YN6 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
PPARGC1BQ86YN6 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
PPARGC1BQ86YN6 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
PPARGC1BQ86YN6 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC31.25■■■□□ 2.59
PPARGC1BQ86YN6 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
PPARGC1BQ86YN6 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
PPARGC1BQ86YN6 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
PPARGC1BQ86YN6 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
PPARGC1BQ86YN6 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
PPARGC1BQ86YN6 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC31.25■■■□□ 2.59
PPARGC1BQ86YN6 AC124283.5-201ENST00000624661 1809 ntBASIC31.25■■■□□ 2.59
PPARGC1BQ86YN6 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC31.25■■■□□ 2.59
PPARGC1BQ86YN6 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
PPARGC1BQ86YN6 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC31.25■■■□□ 2.59
PPARGC1BQ86YN6 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
PPARGC1BQ86YN6 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
PPARGC1BQ86YN6 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
PPARGC1BQ86YN6 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC31.24■■■□□ 2.59
PPARGC1BQ86YN6 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC31.24■■■□□ 2.59
PPARGC1BQ86YN6 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC31.24■■■□□ 2.59
PPARGC1BQ86YN6 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
PPARGC1BQ86YN6 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC31.24■■■□□ 2.59
PPARGC1BQ86YN6 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
PPARGC1BQ86YN6 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC31.24■■■□□ 2.59
PPARGC1BQ86YN6 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
PPARGC1BQ86YN6 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
PPARGC1BQ86YN6 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
PPARGC1BQ86YN6 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC31.24■■■□□ 2.59
PPARGC1BQ86YN6 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC31.24■■■□□ 2.59
PPARGC1BQ86YN6 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC31.24■■■□□ 2.59
PPARGC1BQ86YN6 BRWD1-AS2-201ENST00000603064 1028 ntBASIC31.24■■■□□ 2.59
PPARGC1BQ86YN6 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
PPARGC1BQ86YN6 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC31.24■■■□□ 2.59
PPARGC1BQ86YN6 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
PPARGC1BQ86YN6 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
PPARGC1BQ86YN6 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
PPARGC1BQ86YN6 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
PPARGC1BQ86YN6 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC31.24■■■□□ 2.59
PPARGC1BQ86YN6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC31.23■■■□□ 2.59
PPARGC1BQ86YN6 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
PPARGC1BQ86YN6 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC31.23■■■□□ 2.59
PPARGC1BQ86YN6 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC31.23■■■□□ 2.59
PPARGC1BQ86YN6 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC31.23■■■□□ 2.59
PPARGC1BQ86YN6 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC31.23■■■□□ 2.59
PPARGC1BQ86YN6 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC31.23■■■□□ 2.59
PPARGC1BQ86YN6 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC31.23■■■□□ 2.59
PPARGC1BQ86YN6 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC31.22■■■□□ 2.59
PPARGC1BQ86YN6 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC31.22■■■□□ 2.59
PPARGC1BQ86YN6 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
PPARGC1BQ86YN6 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC31.22■■■□□ 2.59
PPARGC1BQ86YN6 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
PPARGC1BQ86YN6 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC31.22■■■□□ 2.59
PPARGC1BQ86YN6 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
PPARGC1BQ86YN6 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
PPARGC1BQ86YN6 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC31.22■■■□□ 2.59
PPARGC1BQ86YN6 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC31.22■■■□□ 2.59
PPARGC1BQ86YN6 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC31.22■■■□□ 2.59
PPARGC1BQ86YN6 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC31.22■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms