Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 LINC01023-201ENST00000606054 436 ntBASIC21.86■■□□□ 1.09
COL1A2P08123 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.86■■□□□ 1.09
COL1A2P08123 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC21.85■■□□□ 1.09
COL1A2P08123 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.85■■□□□ 1.09
COL1A2P08123 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL1A2P08123 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
COL1A2P08123 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL1A2P08123 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.85■■□□□ 1.09
COL1A2P08123 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.85■■□□□ 1.09
COL1A2P08123 AC211429.1-201ENST00000415277 523 ntBASIC21.85■■□□□ 1.09
COL1A2P08123 TUBB8P6-201ENST00000436895 1288 ntBASIC21.85■■□□□ 1.09
COL1A2P08123 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
COL1A2P08123 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.85■■□□□ 1.09
COL1A2P08123 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL1A2P08123 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.84■■□□□ 1.09
COL1A2P08123 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
COL1A2P08123 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL1A2P08123 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL1A2P08123 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL1A2P08123 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
COL1A2P08123 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
COL1A2P08123 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.84■■□□□ 1.09
COL1A2P08123 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
COL1A2P08123 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
COL1A2P08123 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
COL1A2P08123 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL1A2P08123 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
COL1A2P08123 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL1A2P08123 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL1A2P08123 AC087499.1-201ENST00000418141 1075 ntBASIC21.84■■□□□ 1.09
COL1A2P08123 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
COL1A2P08123 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.84■■□□□ 1.09
COL1A2P08123 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.84■■□□□ 1.09
COL1A2P08123 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.84■■□□□ 1.09
COL1A2P08123 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
COL1A2P08123 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC21.84■■□□□ 1.09
COL1A2P08123 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
COL1A2P08123 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
COL1A2P08123 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
COL1A2P08123 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL1A2P08123 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
COL1A2P08123 ECEL1P3-201ENST00000427961 737 ntBASIC21.83■■□□□ 1.08
COL1A2P08123 AC116562.2-201ENST00000507042 360 ntBASIC21.83■■□□□ 1.08
COL1A2P08123 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
COL1A2P08123 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.83■■□□□ 1.08
COL1A2P08123 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC21.83■■□□□ 1.08
COL1A2P08123 REXO1L10P-201ENST00000615707 1290 ntBASIC21.83■■□□□ 1.08
COL1A2P08123 AL445675.2-201ENST00000620291 557 ntBASIC21.83■■□□□ 1.08
COL1A2P08123 CR392000.1-201ENST00000624770 1228 ntBASIC21.83■■□□□ 1.08
COL1A2P08123 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
COL1A2P08123 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.08
COL1A2P08123 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.08
COL1A2P08123 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
COL1A2P08123 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
COL1A2P08123 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL1A2P08123 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC21.82■■□□□ 1.08
COL1A2P08123 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL1A2P08123 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.82■■□□□ 1.08
COL1A2P08123 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL1A2P08123 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.82■■□□□ 1.08
COL1A2P08123 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL1A2P08123 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC21.82■■□□□ 1.08
COL1A2P08123 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC21.82■■□□□ 1.08
COL1A2P08123 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC21.82■■□□□ 1.08
COL1A2P08123 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.82■■□□□ 1.08
COL1A2P08123 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.82■■□□□ 1.08
COL1A2P08123 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
COL1A2P08123 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
COL1A2P08123 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
COL1A2P08123 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.82■■□□□ 1.08
COL1A2P08123 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL1A2P08123 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
COL1A2P08123 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC21.82■■□□□ 1.08
COL1A2P08123 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
COL1A2P08123 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
COL1A2P08123 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COL1A2P08123 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COL1A2P08123 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL1A2P08123 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COL1A2P08123 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.81■■□□□ 1.08
COL1A2P08123 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COL1A2P08123 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.81■■□□□ 1.08
COL1A2P08123 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC21.81■■□□□ 1.08
COL1A2P08123 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC21.81■■□□□ 1.08
COL1A2P08123 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COL1A2P08123 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.81■■□□□ 1.08
COL1A2P08123 AC026271.3-201ENST00000571884 352 ntBASIC21.81■■□□□ 1.08
COL1A2P08123 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL1A2P08123 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
COL1A2P08123 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC21.81■■□□□ 1.08
COL1A2P08123 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL1A2P08123 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
COL1A2P08123 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.81■■□□□ 1.08
COL1A2P08123 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL1A2P08123 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
COL1A2P08123 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC21.81■■□□□ 1.08
COL1A2P08123 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL1A2P08123 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
COL1A2P08123 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.81■■□□□ 1.08
COL1A2P08123 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms