Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SFTPBP07988 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.2■□□□□ 0.34
SFTPBP07988 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SFTPBP07988 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.2■□□□□ 0.34
SFTPBP07988 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SFTPBP07988 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SFTPBP07988 NCF1B-203ENST00000435988 1254 ntBASIC17.2■□□□□ 0.34
SFTPBP07988 TERF1P5-201ENST00000477545 1207 ntBASIC17.2■□□□□ 0.34
SFTPBP07988 AC104771.1-201ENST00000603335 964 ntBASIC17.2■□□□□ 0.34
SFTPBP07988 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SFTPBP07988 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.2■□□□□ 0.34
SFTPBP07988 AC013268.1-206ENST00000638368 961 ntBASIC17.2■□□□□ 0.34
SFTPBP07988 AC112229.1-201ENST00000639295 961 ntBASIC17.2■□□□□ 0.34
SFTPBP07988 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SFTPBP07988 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.2■□□□□ 0.34
SFTPBP07988 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SFTPBP07988 AC020763.4-201ENST00000623414 4170 ntBASIC17.2■□□□□ 0.34
SFTPBP07988 DPP3P2-201ENST00000416030 1696 ntBASIC17.2■□□□□ 0.34
SFTPBP07988 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.2■□□□□ 0.34
SFTPBP07988 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.2■□□□□ 0.34
SFTPBP07988 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SFTPBP07988 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SFTPBP07988 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SFTPBP07988 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.19■□□□□ 0.34
SFTPBP07988 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SFTPBP07988 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SFTPBP07988 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SFTPBP07988 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC17.19■□□□□ 0.34
SFTPBP07988 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SFTPBP07988 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SFTPBP07988 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SFTPBP07988 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SFTPBP07988 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.19■□□□□ 0.34
SFTPBP07988 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SFTPBP07988 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SFTPBP07988 AL109923.1-201ENST00000618799 583 ntBASIC17.19■□□□□ 0.34
SFTPBP07988 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.19■□□□□ 0.34
SFTPBP07988 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
SFTPBP07988 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SFTPBP07988 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SFTPBP07988 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SFTPBP07988 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SFTPBP07988 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SFTPBP07988 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SFTPBP07988 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SFTPBP07988 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SFTPBP07988 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SFTPBP07988 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SFTPBP07988 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SFTPBP07988 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.18■□□□□ 0.34
SFTPBP07988 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.18■□□□□ 0.34
SFTPBP07988 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.18■□□□□ 0.34
SFTPBP07988 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SFTPBP07988 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SFTPBP07988 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SFTPBP07988 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.18■□□□□ 0.34
SFTPBP07988 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SFTPBP07988 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SFTPBP07988 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SFTPBP07988 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SFTPBP07988 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.18■□□□□ 0.34
SFTPBP07988 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.18■□□□□ 0.34
SFTPBP07988 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SFTPBP07988 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SFTPBP07988 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SFTPBP07988 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SFTPBP07988 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.18■□□□□ 0.34
SFTPBP07988 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.18■□□□□ 0.34
SFTPBP07988 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.18■□□□□ 0.34
SFTPBP07988 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
SFTPBP07988 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.17■□□□□ 0.34
SFTPBP07988 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SFTPBP07988 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SFTPBP07988 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SFTPBP07988 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SFTPBP07988 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC17.17■□□□□ 0.34
SFTPBP07988 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
SFTPBP07988 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SFTPBP07988 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SFTPBP07988 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.17■□□□□ 0.34
SFTPBP07988 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SFTPBP07988 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SFTPBP07988 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SFTPBP07988 GPX1P1-201ENST00000388829 606 ntBASIC17.17■□□□□ 0.34
SFTPBP07988 AL020996.1-203ENST00000536896 2307 ntBASIC17.17■□□□□ 0.34
SFTPBP07988 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SFTPBP07988 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
SFTPBP07988 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SFTPBP07988 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SFTPBP07988 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
SFTPBP07988 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.17■□□□□ 0.34
SFTPBP07988 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SFTPBP07988 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SFTPBP07988 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
SFTPBP07988 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SFTPBP07988 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SFTPBP07988 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
SFTPBP07988 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SFTPBP07988 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.16■□□□□ 0.34
SFTPBP07988 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 240.4 ms