Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.26■□□□□ 0.19
TMEM56-RWDD3S4R434 AL356652.1-201ENST00000615962 565 ntBASIC16.26■□□□□ 0.19
TMEM56-RWDD3S4R434 NME4-211ENST00000620944 1193 ntTSL 2 BASIC16.26■□□□□ 0.19
TMEM56-RWDD3S4R434 MIR6084-201ENST00000622012 110 ntBASIC16.26■□□□□ 0.19
TMEM56-RWDD3S4R434 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM56-RWDD3S4R434 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM56-RWDD3S4R434 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
TMEM56-RWDD3S4R434 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM56-RWDD3S4R434 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TMEM56-RWDD3S4R434 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
TMEM56-RWDD3S4R434 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
TMEM56-RWDD3S4R434 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM56-RWDD3S4R434 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM56-RWDD3S4R434 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM56-RWDD3S4R434 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM56-RWDD3S4R434 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
TMEM56-RWDD3S4R434 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM56-RWDD3S4R434 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
TMEM56-RWDD3S4R434 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.25■□□□□ 0.19
TMEM56-RWDD3S4R434 AL138781.2-201ENST00000617896 1843 ntBASIC16.25■□□□□ 0.19
TMEM56-RWDD3S4R434 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEM56-RWDD3S4R434 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEM56-RWDD3S4R434 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TMEM56-RWDD3S4R434 AL031432.3-201ENST00000607698 485 ntBASIC16.25■□□□□ 0.19
TMEM56-RWDD3S4R434 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM56-RWDD3S4R434 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM56-RWDD3S4R434 AC087633.2-202ENST00000565166 1439 ntBASIC16.25■□□□□ 0.19
TMEM56-RWDD3S4R434 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM56-RWDD3S4R434 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM56-RWDD3S4R434 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM56-RWDD3S4R434 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM56-RWDD3S4R434 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM56-RWDD3S4R434 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
TMEM56-RWDD3S4R434 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.25■□□□□ 0.19
TMEM56-RWDD3S4R434 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM56-RWDD3S4R434 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TMEM56-RWDD3S4R434 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM56-RWDD3S4R434 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
TMEM56-RWDD3S4R434 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.24■□□□□ 0.19
TMEM56-RWDD3S4R434 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM56-RWDD3S4R434 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM56-RWDD3S4R434 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM56-RWDD3S4R434 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.24■□□□□ 0.19
TMEM56-RWDD3S4R434 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM56-RWDD3S4R434 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.24■□□□□ 0.19
TMEM56-RWDD3S4R434 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
TMEM56-RWDD3S4R434 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM56-RWDD3S4R434 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM56-RWDD3S4R434 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.24■□□□□ 0.19
TMEM56-RWDD3S4R434 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.24■□□□□ 0.19
TMEM56-RWDD3S4R434 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TMEM56-RWDD3S4R434 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM56-RWDD3S4R434 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM56-RWDD3S4R434 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TMEM56-RWDD3S4R434 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TMEM56-RWDD3S4R434 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM56-RWDD3S4R434 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM56-RWDD3S4R434 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM56-RWDD3S4R434 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM56-RWDD3S4R434 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM56-RWDD3S4R434 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TMEM56-RWDD3S4R434 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM56-RWDD3S4R434 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM56-RWDD3S4R434 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM56-RWDD3S4R434 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM56-RWDD3S4R434 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM56-RWDD3S4R434 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM56-RWDD3S4R434 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM56-RWDD3S4R434 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM56-RWDD3S4R434 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM56-RWDD3S4R434 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM56-RWDD3S4R434 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM56-RWDD3S4R434 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM56-RWDD3S4R434 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.23■□□□□ 0.19
TMEM56-RWDD3S4R434 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC16.23■□□□□ 0.19
TMEM56-RWDD3S4R434 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM56-RWDD3S4R434 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
TMEM56-RWDD3S4R434 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.23■□□□□ 0.19
TMEM56-RWDD3S4R434 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM56-RWDD3S4R434 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.23■□□□□ 0.19
TMEM56-RWDD3S4R434 PTBP1P-201ENST00000554374 1601 ntBASIC16.23■□□□□ 0.19
TMEM56-RWDD3S4R434 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.23■□□□□ 0.19
TMEM56-RWDD3S4R434 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TMEM56-RWDD3S4R434 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TMEM56-RWDD3S4R434 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
TMEM56-RWDD3S4R434 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM56-RWDD3S4R434 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
TMEM56-RWDD3S4R434 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM56-RWDD3S4R434 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM56-RWDD3S4R434 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM56-RWDD3S4R434 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM56-RWDD3S4R434 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TMEM56-RWDD3S4R434 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TMEM56-RWDD3S4R434 AP001271.2-201ENST00000624018 1556 ntBASIC16.22■□□□□ 0.19
TMEM56-RWDD3S4R434 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TMEM56-RWDD3S4R434 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.22■□□□□ 0.19
TMEM56-RWDD3S4R434 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEM56-RWDD3S4R434 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.22■□□□□ 0.19
TMEM56-RWDD3S4R434 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
TMEM56-RWDD3S4R434 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms