Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RFX6Q8HWS3 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RFX6Q8HWS3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RFX6Q8HWS3 LSM12P1-201ENST00000411836 588 ntBASIC20.68■□□□□ 0.9
RFX6Q8HWS3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.68■□□□□ 0.9
RFX6Q8HWS3 AC105036.2-201ENST00000569468 176 ntBASIC20.68■□□□□ 0.9
RFX6Q8HWS3 AC133552.2-202ENST00000575694 574 ntBASIC20.68■□□□□ 0.9
RFX6Q8HWS3 AL050303.2-201ENST00000619798 666 ntBASIC20.68■□□□□ 0.9
RFX6Q8HWS3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RFX6Q8HWS3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFX6Q8HWS3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RFX6Q8HWS3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.68■□□□□ 0.9
RFX6Q8HWS3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RFX6Q8HWS3 KRT16P6-202ENST00000425692 1426 ntBASIC20.68■□□□□ 0.9
RFX6Q8HWS3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFX6Q8HWS3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFX6Q8HWS3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.67■□□□□ 0.9
RFX6Q8HWS3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFX6Q8HWS3 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RFX6Q8HWS3 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RFX6Q8HWS3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.67■□□□□ 0.9
RFX6Q8HWS3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RFX6Q8HWS3 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.67■□□□□ 0.9
RFX6Q8HWS3 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFX6Q8HWS3 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.67■□□□□ 0.9
RFX6Q8HWS3 MIR663A-201ENST00000385250 93 ntBASIC20.67■□□□□ 0.9
RFX6Q8HWS3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.67■□□□□ 0.9
RFX6Q8HWS3 AC026185.1-201ENST00000445748 174 ntBASIC20.67■□□□□ 0.9
RFX6Q8HWS3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.67■□□□□ 0.9
RFX6Q8HWS3 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.67■□□□□ 0.9
RFX6Q8HWS3 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.67■□□□□ 0.9
RFX6Q8HWS3 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.67■□□□□ 0.9
RFX6Q8HWS3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.67■□□□□ 0.9
RFX6Q8HWS3 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFX6Q8HWS3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.67■□□□□ 0.9
RFX6Q8HWS3 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.67■□□□□ 0.9
RFX6Q8HWS3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RFX6Q8HWS3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
RFX6Q8HWS3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFX6Q8HWS3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFX6Q8HWS3 AL158211.5-201ENST00000623583 2518 ntBASIC20.67■□□□□ 0.9
RFX6Q8HWS3 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.67■□□□□ 0.9
RFX6Q8HWS3 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFX6Q8HWS3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RFX6Q8HWS3 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFX6Q8HWS3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RFX6Q8HWS3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.66■□□□□ 0.9
RFX6Q8HWS3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.66■□□□□ 0.9
RFX6Q8HWS3 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFX6Q8HWS3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.66■□□□□ 0.9
RFX6Q8HWS3 AF201337.1-201ENST00000520239 748 ntBASIC20.66■□□□□ 0.9
RFX6Q8HWS3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.66■□□□□ 0.9
RFX6Q8HWS3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFX6Q8HWS3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFX6Q8HWS3 MKRN4P-201ENST00000444706 1521 ntBASIC20.66■□□□□ 0.9
RFX6Q8HWS3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFX6Q8HWS3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFX6Q8HWS3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFX6Q8HWS3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RFX6Q8HWS3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.66■□□□□ 0.9
RFX6Q8HWS3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RFX6Q8HWS3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFX6Q8HWS3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFX6Q8HWS3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.65■□□□□ 0.9
RFX6Q8HWS3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.65■□□□□ 0.9
RFX6Q8HWS3 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.65■□□□□ 0.9
RFX6Q8HWS3 HLA-G-202ENST00000376815 851 ntBASIC20.65■□□□□ 0.9
RFX6Q8HWS3 HLA-G-203ENST00000376818 1127 ntBASIC20.65■□□□□ 0.9
RFX6Q8HWS3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.65■□□□□ 0.9
RFX6Q8HWS3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.65■□□□□ 0.9
RFX6Q8HWS3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
RFX6Q8HWS3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
RFX6Q8HWS3 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
RFX6Q8HWS3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFX6Q8HWS3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFX6Q8HWS3 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.64■□□□□ 0.89
RFX6Q8HWS3 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFX6Q8HWS3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.64■□□□□ 0.89
RFX6Q8HWS3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
RFX6Q8HWS3 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.64■□□□□ 0.89
RFX6Q8HWS3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.64■□□□□ 0.89
RFX6Q8HWS3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFX6Q8HWS3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFX6Q8HWS3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.64■□□□□ 0.89
RFX6Q8HWS3 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RFX6Q8HWS3 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFX6Q8HWS3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
RFX6Q8HWS3 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RFX6Q8HWS3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.63■□□□□ 0.89
RFX6Q8HWS3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RFX6Q8HWS3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RFX6Q8HWS3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.63■□□□□ 0.89
RFX6Q8HWS3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RFX6Q8HWS3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RFX6Q8HWS3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
RFX6Q8HWS3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFX6Q8HWS3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFX6Q8HWS3 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFX6Q8HWS3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.63■□□□□ 0.89
RFX6Q8HWS3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms